Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq181137 138 1e-27 >seq181137 Length=58212 Score = 138 bits (152), Expect = 1e-27 Identities = 171/234 (73%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 || ||||||||| ||||| || || || || |||||| | || |||||||| ||||| | Sbjct 2073 CGGCATGCAGATCTTTGTTAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTGGAGTC 2014 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 || || | ||||| | || ||| ||| ||||||||||| || || || || || || Sbjct 2013 TTCGGATACCATTGACAACGTGAAAGCAAAGATTCAAGACAAGGAGGGTATTCCCCCAGA 1954 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163 || |||||| | || | ||||| || || | |||||| | ||| | ||||| || Sbjct 1953 CCAGCAGCGTCTTATCTTTGCCGGGAAGCAGCTCGAAGACGGCCGTACCTTATCCGACTA 1894 Query 27164 CAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| || |||||||| ||| | ||| | || | ||| |||| |||||||| Sbjct 1893 CAACATCCAGAAGGAGTCTACCCTTCATCTCGTCCTCCGTCTGCGTGGTGGCAT 1840 Score = 109 bits (120), Expect = 5e-19 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || |||||| | || || || || ||||| | || Sbjct 1613 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACGCTGGAGGTGGAGTCTTCG 1554 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || || || ||||| |||||||| || || ||||| Sbjct 1553 GACACCATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAAGGCATTCCTCCTGATCAG 1494 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | |||||| || || ||||| || || ||| |||| ||||| || Sbjct 1493 CAACGTCTCATCTTCGCCGGGAAGCAGTTGGAGGATGGTCGTACCCTTTCGGATTATAAT 1434 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGG 27195 || || ||||||||||| | ||||||| Sbjct 1433 ATCCAGAAGGAGTCGACTCTTCATTTGG 1406 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || || || || ||| | || || || || ||||| | || Sbjct 1842 CATGCAGATCTTCGTCAAGACCCTCACAGGGAAGACGATCACCCTCGAGGTGGAGTCCTC 1783 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || || | || || || || || || || || ||||| || || || || Sbjct 1782 TGACACCATCGATAATGTGAAGGCGAAGATCCAGGATAAGGAGGGCATCCCCCCAGACCA 1723 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| ||| | || | ||||||||| || | ||||| | ||| |||| |||||||| Sbjct 1722 ACAACGTCTTATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACCCTTTCTGATTACAA 1663 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| || |||||||| | ||| | || | ||| |||| ||||| || Sbjct 1662 CATTCAGAAAGAGTCGACTCTCCATCTCGTCCTTCGTCTGCGTGGTGGAAT 1612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433954297529177