Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq181137 203 7e-47 seq178676 95.1 3e-14 seq179408 89.7 1e-12 seq179407 89.7 1e-12 seq176134 89.7 1e-12 >seq181137 Length=58212 Score = 203 bits (224), Expect = 7e-47 Identities = 172/212 (81%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || || ||||| |||||||| || ||||| ||||| | |||||| | |||||| Sbjct 1630 AGGACGAGATGGAGAGTCGACTCTTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCT 1689 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| ||||||||||| ||||||||||| || || | || ||||| ||| Sbjct 1690 TCGAGCTGCTTGCCGGCGAAGATAAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTATCC 1749 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || ||||||||||||||| || |||||||| ||||||||| Sbjct 1750 TGGATCTTCGCCTTCACATTATCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATCGTC 1809 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || || | |||||| Sbjct 1810 TTCCCTGTGAGGGTCTTGACGAAGATCTGCAT 1841 Score = 201 bits (222), Expect = 3e-46 Identities = 167/204 (82%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 |||||||| ||||| || ||||| |||||||||| |||||| | ||||| |||| |||| Sbjct 1411 TGAAGAGTCGACTCCTTCTGGATATTATAATCCGAAAGGGTACGACCATCCTCCAACTGC 1470 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || |||||||| || ||||| || |||||||||| |||||||||||||||||||| Sbjct 1471 TTCCCGGCGAAGATGAGACGTTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTC 1530 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 |||||||| ||||||||||| || || ||||| || ||||||||||| |||||| Sbjct 1531 GCCTTCACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAGCGTGATCGTCTTGCCCGTG 1590 Query 211092 AGAGTCTTTACAAACACCTGCATT 211115 || ||||| || || | ||||||| Sbjct 1591 AGGGTCTTGACGAAGATCTGCATT 1614 Score = 104 bits (114), Expect = 5e-17 Identities = 172/261 (66%), Gaps = 48/261 (18%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| ||||||||||| || |||||||| ||||||| || || | ||||| Sbjct 2309 AGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGGCCATCC 2368 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAA-------------- 211008 || ||||||||||| |||||||| | ||| || ||||| || || | Sbjct 2369 TCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATGCTAAAAGGCGGT 2428 Query 211009 -------------------------------CT---CCTTCCTTGTCCTGGATCTTTTGT 211034 || || |||||||| |||||||| Sbjct 2429 CAGCTCGTTATCGGTTGGGCGTATCGAGGCGCTTACCCCTCCTTGTCTTGGATCTTGGCC 2488 Query 211035 TTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGA 211094 || ||||| || ||||| || ||| ||||||||||| ||||| |||||||| |||||| Sbjct 2489 TTGACGTTGTCAATGGTATCTGAGGACTCAACCTCGAGGGTGATTGTCTTTCCAGTGAGA 2548 Query 211095 GTCTTTACAAACACCTGCATT 211115 |||||||| || | ||||||| Sbjct 2549 GTCTTTACGAAGATCTGCATT 2569 Score = 96.9 bits (106), Expect = 8e-15 Identities = 71/83 (86%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| ||||||||||| || ||||||||||| || | ||||| | |||||| Sbjct 2086 AGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGAGAGGGTACGTCCATCC 2145 Query 210963 TCCAGCTGCTTGCCTGCGAAGAT 210985 || ||||||||||| |||||||| Sbjct 2146 TCAAGCTGCTTGCCAGCGAAGAT 2168 >seq178676 Length=5582 Score = 95.1 bits (104), Expect = 3e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || ||||||||||||||||| || ||||| ||||||||||| || || ||||| Sbjct 4513 CCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGACGACTCCACCTCT 4454 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || |||||||||||||||||||| ||||| || || | ||||| || Sbjct 4453 AGGGTGATCGTCTTTCCCGTGAGGGTCTTGACGAAAATTTGCATCTT 4407 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| | ||||||||| || ||||||||||| |||| ||||| | ||||| Sbjct 4685 AGGACCAAGTGCAAAGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTTCGGCCATCC 4626 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 || |||||||| || |||||||| || || || ||||| || || Sbjct 4625 TCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGGGG 4582 >seq179408 Length=3068 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| | ||||||||| || ||||||||||| |||| ||||| | ||||| Sbjct 2867 AGGACCAAGTGCAAAGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTTCGGCCATCC 2926 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 || |||||||| || |||||||| || || || ||||| || || Sbjct 2927 TCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGGGG 2970 >seq179407 Length=3065 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| | ||||||||| || ||||||||||| |||| ||||| | ||||| Sbjct 2864 AGGACCAAGTGCAAAGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTTCGGCCATCC 2923 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 || |||||||| || |||||||| || || || ||||| || || Sbjct 2924 TCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGGGG 2967 >seq176134 Length=3119 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || |||||||| |||||||| || || || || ||||| |||||| ||||||||| Sbjct 2975 CCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCAATGGTATCAGAGGACTCAACCTCG 2916 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| |||||||| ||||| ||||| || || | |||||| Sbjct 2915 AGGGTGATGGTCTTTCCGGTGAGGGTCTTCACGAAGATCTGCAT 2872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1156441739980485