Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq181137 89.7 4e-13 >seq181137 Length=58212 Score = 89.7 bits (98), Expect = 4e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || |||| | || || |||| || ||||| || || ||||| Sbjct 1878 CTCCTTCTGGATGTTGTAGTCGGATAAGGTACGGCCGTCTTCGAGCTGCTTCCCGGCAAA 1937 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 ||||||||||||||||| | ||| | | ||| |||| | ||| | | || || ||| Sbjct 1938 GATAAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGT-CTTGAATCTTTGCTTTCACGT 1996 Query 39213 CG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAA 39271 | | | ||||| |||||||| || | ||||| | || ||||| || || |||| Sbjct 1997 TGTCAATGGTATCCGAAGACTCCACCTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTAA 2056 Query 39272 CAAAGATTTGCAT 39284 ||||||| ||||| Sbjct 2057 CAAAGATCTGCAT 2069 Score = 82.4 bits (90), Expect = 7e-11 Identities = 145/209 (69%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 39077 CCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAA 39136 ||||||| || || ||| || || ||||||||||| | ||| || || | || || | Sbjct 1406 CCAAATGAAGAGTCGACTCCTTCTGGATATTATAATCCGAAAGGGTACGACCATCCTCCA 1465 Query 39137 GCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGA 39196 ||| || || || || || ||||| ||||| || | || | || || |||||| || Sbjct 1466 ACTGCTTCCCGGCGAAGATGAGACGTTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGA 1525 Query 39197 TTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 | ||| || | ||| | | | || || |||||||| |||| |||||| | || Sbjct 1526 TCTTCGCCTTCA-CGTTGTCGATGGTGTCCGAAGACTCCACCTCCAGCGTGATCGTCTTG 1584 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||| || || || || ||||| ||||| Sbjct 1585 CCCGTGAGGGTCTTGACGAAGATCTGCAT 1613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428590254208457