Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq182162 86.0 5e-12 seq178545 86.0 5e-12 seq178544 86.0 5e-12 >seq182162 Length=33735 Score = 86.0 bits (94), Expect = 5e-12 Identities = 125/175 (71%), Gaps = 4/175 (2%) Strand=Plus/Minus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC--TCGA 30074 ||||||||||| || ||||| ||||| ||||||| ||| || || || | | | | || Sbjct 30008 AAATGCCTCCATTGAAACCCATACACGGGTCCCAAGTCACCTTC--CCTTCTACCATGGA 29951 Query 30075 AGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCT 30134 ||||| | || | ||| | | || ||||| | ||||||||||| | ||||||| Sbjct 29950 GACCCCTACTCTCTAGAAACGCCTTCGATCCGTTTCCATCCCAGATCTTGATGCCCTTCT 29891 Query 30135 CGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCAC 30189 |||||| |||||| ||||| || || |||||| || || |||||||| Sbjct 29890 TTGAGAGCAAAGTGGAGTCGGTGGAGCCGTGGATGAACCAAAGAAGTTCCTCCAC 29836 >seq178545 Length=9044 Score = 86.0 bits (94), Expect = 5e-12 Identities = 125/175 (71%), Gaps = 4/175 (2%) Strand=Plus/Plus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC--TCGA 30074 ||||||||||| || ||||| ||||| ||||||| ||| || || || | | | | || Sbjct 8637 AAATGCCTCCATTGAAACCCATACACGGGTCCCAAGTCACCTTC--CCTTCTACCATGGA 8694 Query 30075 AGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCT 30134 ||||| | || | ||| | | || ||||| | ||||||||||| | ||||||| Sbjct 8695 GACCCCTACTCTCTAGAAACGCCTTCGATCCGTTTCCATCCCAGATCTTGATGCCCTTCT 8754 Query 30135 CGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCAC 30189 |||||| |||||| ||||| || || |||||| || || |||||||| Sbjct 8755 TTGAGAGCAAAGTGGAGTCGGTGGAGCCGTGGATGAACCAAAGAAGTTCCTCCAC 8809 >seq178544 Length=9039 Score = 86.0 bits (94), Expect = 5e-12 Identities = 125/175 (71%), Gaps = 4/175 (2%) Strand=Plus/Plus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC--TCGA 30074 ||||||||||| || ||||| ||||| ||||||| ||| || || || | | | | || Sbjct 8632 AAATGCCTCCATTGAAACCCATACACGGGTCCCAAGTCACCTTC--CCTTCTACCATGGA 8689 Query 30075 AGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCT 30134 ||||| | || | ||| | | || ||||| | ||||||||||| | ||||||| Sbjct 8690 GACCCCTACTCTCTAGAAACGCCTTCGATCCGTTTCCATCCCAGATCTTGATGCCCTTCT 8749 Query 30135 CGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCAC 30189 |||||| |||||| ||||| || || |||||| || || |||||||| Sbjct 8750 TTGAGAGCAAAGTGGAGTCGGTGGAGCCGTGGATGAACCAAAGAAGTTCCTCCAC 8804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405259858646254