Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq182162 93.3 3e-14 seq178545 93.3 3e-14 seq178544 93.3 3e-14 >seq182162 Length=33735 Score = 93.3 bits (102), Expect = 3e-14 Identities = 134/187 (72%), Gaps = 4/187 (2%) Strand=Plus/Minus Query 27499 TACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 27558 || || || || |||||||||||||| ||||| ||||| ||||||| ||| || || || Sbjct 30020 TATTCAGCACCAAAATGCCTCCATTGAAACCCATACACGGGTCCCAAGTCACCTTC--CC 29963 Query 27559 CTGTGC--TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCT 27616 | | | | || ||||| | || | ||| | | || ||||| | |||||||||| Sbjct 29962 TTCTACCATGGAGACCCCTACTCTCTAGAAACGCCTTCGATCCGTTTCCATCCCAGATCT 29903 Query 27617 TTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCT 27676 | | ||||||| |||||| |||||| ||||| || || |||||| || || | Sbjct 29902 TGATGCCCTTCTTTGAGAGCAAAGTGGAGTCGGTGGAGCCGTGGATGAACCAAAGAAGTT 29843 Query 27677 CCTCCAC 27683 ||||||| Sbjct 29842 CCTCCAC 29836 >seq178545 Length=9044 Score = 93.3 bits (102), Expect = 3e-14 Identities = 134/187 (72%), Gaps = 4/187 (2%) Strand=Plus/Plus Query 27499 TACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 27558 || || || || |||||||||||||| ||||| ||||| ||||||| ||| || || || Sbjct 8625 TATTCAGCACCAAAATGCCTCCATTGAAACCCATACACGGGTCCCAAGTCACCTTC--CC 8682 Query 27559 CTGTGC--TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCT 27616 | | | | || ||||| | || | ||| | | || ||||| | |||||||||| Sbjct 8683 TTCTACCATGGAGACCCCTACTCTCTAGAAACGCCTTCGATCCGTTTCCATCCCAGATCT 8742 Query 27617 TTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCT 27676 | | ||||||| |||||| |||||| ||||| || || |||||| || || | Sbjct 8743 TGATGCCCTTCTTTGAGAGCAAAGTGGAGTCGGTGGAGCCGTGGATGAACCAAAGAAGTT 8802 Query 27677 CCTCCAC 27683 ||||||| Sbjct 8803 CCTCCAC 8809 >seq178544 Length=9039 Score = 93.3 bits (102), Expect = 3e-14 Identities = 134/187 (72%), Gaps = 4/187 (2%) Strand=Plus/Plus Query 27499 TACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 27558 || || || || |||||||||||||| ||||| ||||| ||||||| ||| || || || Sbjct 8620 TATTCAGCACCAAAATGCCTCCATTGAAACCCATACACGGGTCCCAAGTCACCTTC--CC 8677 Query 27559 CTGTGC--TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCT 27616 | | | | || ||||| | || | ||| | | || ||||| | |||||||||| Sbjct 8678 TTCTACCATGGAGACCCCTACTCTCTAGAAACGCCTTCGATCCGTTTCCATCCCAGATCT 8737 Query 27617 TTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCT 27676 | | ||||||| |||||| |||||| ||||| || || |||||| || || | Sbjct 8738 TGATGCCCTTCTTTGAGAGCAAAGTGGAGTCGGTGGAGCCGTGGATGAACCAAAGAAGTT 8797 Query 27677 CCTCCAC 27683 ||||||| Sbjct 8798 CCTCCAC 8804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 368685384694559