Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq174905 129 8e-25 >seq174905 Length=21728 Score = 129 bits (142), Expect = 8e-25 Identities = 355/537 (66%), Gaps = 8/537 (1%) Strand=Plus/Minus Query 46651 CCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTT 46710 || ||||| | ||| || | ||||| || || || | || ||||| | ||||||||| Sbjct 16840 CCCTCATCGCGACTGATGAGCTCGTTGGAGAAGGTCAAGCCGGGCATCATTCCACGCTTC 16781 Query 46711 TTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAAT 46770 || | ||| || || | ||||| || ||||||||||| || || || || || || || Sbjct 16780 TTCATCCAGAAGATGGATGCGAACGACCCAGAAAAGAAAATCCCCTCAACGGCGGCAAAG 16721 Query 46771 GCGACAAGTCTCTCTCCGTAACTGGCA-TC-ATTATGA-ATCCACCTTTGAGCCCAATCA 46827 |||||||| | || ||| || ||| | || | || |||||| | | ||||| ||| Sbjct 16720 GCGACAAGGCGTTCACCGAAAGTGGAACTCTGGTCGGAGATCCACTTGAGGGCCCAGTCA 16661 Query 46828 GCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCA 46887 ||||| || | || || || ||||| | ||| | || || |||| || | | Sbjct 16660 GCCTTGCGTTTGATGCAGGGAATGGTTTCAACAGCGTCGAACAGGAAGTCGCGTTGAGCG 16601 Query 46888 CTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATA 46947 ||||| | || || || || | ||| || |||| || || |||||||| || Sbjct 16600 GGCTCTTTGATGTACGTGTCGATGAGGAGAGAGTAGGTTTCGGAGTGGATGTTTTCCATC 16541 Query 46948 GCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGT 47007 ||||| || || || || || | || || | ||||| || | || ||| Sbjct 16540 ATAATCTGGAAGCCATAGAAGCAACGAGCCTCGGCGGCTTGTACTTCACCGGAGAAGCGT 16481 Query 47008 TC-AGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTT 47066 || ||| | || ||||| || || || ||| || || || || || | || ||| Sbjct 16480 TCGAGA-AGGTTTTCATTGACGATACCGTCAGACGCCGCGAAGAAAGCGAGAACGTGTGA 16422 Query 47067 AATAAAATATTTTTCATCGGTAGTCA---GTTTATTCCAGTCATTGATATCTTTTGATAT 47123 ||| || | || | | ||| | || |||||||||| | ||| || || | Sbjct 16421 AATGAAGTGGCGCTCGTTGTCGTTCAGGCGGTTGTTCCAGTCATGAAGATCCTTCGAGAG 16362 Query 47124 ATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATAT 47180 ||| | ||||||||||||||||| |||||||| ||||| || ||||| | ||| || Sbjct 16361 ATCCATCTCTTCAGCTGTCCAGAACGACGCCTCCGCTTTCTTGTACATCTGCCAGAT 16305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 711308116428480