Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq181137 179 8e-40 seq174905 118 2e-21 seq175168 98.7 2e-15 seq178676 95.1 3e-14 seq31532 89.7 1e-12 >seq181137 Length=58212 Score = 179 bits (198), Expect = 8e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||||||| ||||| || ||||| | || ||||| || |||||||| |||| | Sbjct 1615 CCACCACGCAGACGAAGGACGAGATGGAGAGTCGACTCTTTCTGAATGTTGTAATCAGAA 1674 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||||||||| || || || || ||||| ||||| | |||||||||||| || Sbjct 1675 AGGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATAAGACGTTGTTGGTCTGGGGGG 1734 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || |||||||| || |||||||| || || || ||||||| ||||| || | || || Sbjct 1735 ATGCCCTCCTTATCCTGGATCTTCGCCTTCACATTATCGATGGTGTCAGAGGACTCCACC 1794 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| || || | ||||| ||||| |||||||| Sbjct 1795 TCGAGGGTGATCGTCTTCCCTGTGAGGGTCTTGACGAAGATCTGCAT 1841 Score = 179 bits (198), Expect = 8e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||||||| || || || ||||| | || || || |||||||||||||| | Sbjct 1843 CCACCACGCAGACGGAGGACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAT 1902 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | || ||||| || || || || |||||||||||||| | ||| || ||||| ||| Sbjct 1903 AAGGTACGGCCGTCTTCGAGCTGCTTCCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGA 1962 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||||||||||||||| ||||||||||| ||| | || || || ||||||| || || Sbjct 1963 ATACCCTCCTTGTCTTGAATCTTTGCTTTCACGTTGTCAATGGTATCCGAAGACTCCACC 2022 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| ||||| ||||| | |||||||| || |||||||| Sbjct 2023 TCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTAACAAAGATCTGCAT 2069 Score = 152 bits (168), Expect = 1e-31 Identities = 149/192 (78%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || ||||| || || || | ||| || || |||||||| | || |||||||| ||| Sbjct 1423 TCCTTCTGGATATTATAATCCGAAAGGGTACGACCATCCTCCAACTGCTTCCCGGCGAAG 1482 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | |||||| || ||| ||||| || |||||||| |||||||| || || ||| | Sbjct 1483 ATGAGACGTTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTCGCCTTCACGTTG 1542 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| |||||||||| || || || || ||||||||||| ||||| | ||||| ||| Sbjct 1543 TCGATGGTGTCCGAAGACTCCACCTCCAGCGTGATCGTCTTGCCCGTGAGGGTCTTGACG 1602 Query 283089 AATATCTGCATT 283100 || ||||||||| Sbjct 1603 AAGATCTGCATT 1614 Score = 91.5 bits (100), Expect = 3e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 |||||||||||||||||||| || || ||| | || || || || || | || || ||| Sbjct 2465 CCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATGGTATCTGAGGACTCAACCTCG 2524 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || ||||| ||||| || || | |||||| ||||| ||||||||| Sbjct 2525 AGGGTGATTGTCTTTCCAGTGAGAGTCTTTACGAAGATCTGCATT 2569 >seq174905 Length=21728 Score = 118 bits (130), Expect = 2e-21 Identities = 136/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 230205 GACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAA 230264 || ||| |||| | | || ||||||||||||||| | |||||| | || || ||||| Sbjct 17006 GATGCTCTTCCCGTCAGCCTCATCGGCATGAATGCTAAGCTCATGTGCCAGTACATCGAG 17065 Query 230265 TTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAAC 230324 ||||| || || ||| | | || | || || | || || || || ||||||| ||| Sbjct 17066 TTCGTTGCCGACCGTCTGCTTGTATCTCTGGGCAATGACAAGGTCTACAACTCCACCAAC 17125 Query 230325 CCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGT 230384 ||||||| || ||||| | || || |||||||| || || ||||||||||| |||||| Sbjct 17126 CCCTTCGACTTCATGGACATGATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGT 17185 Query 230385 GTC 230387 ||| Sbjct 17186 GTC 17188 Score = 91.5 bits (100), Expect = 3e-13 Identities = 119/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282 || || ||||| ||||| || ||| | ||||| || |||||||| || ||||| | Sbjct 14501 CTGATAGGCATCAATGCGCCACTAATGTGCCAATACATTGAATTCGTCGCCGATCGCTTA 14442 Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342 |||||| || || |||| ||| ||| | || || |||||||||| || ||||| Sbjct 14441 CTCGTGGATCTTGGCAACGAAAAACACTATCATTCAAAAAACCCCTTCGACTTCATGGAT 14382 Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTC 230387 | || ||||| |||| || | ||||| || |||||||||||| Sbjct 14381 ATGATATCACTAGAGGGCAAGGCGAACTTTTTTGAAAAGCGTGTC 14337 >seq175168 Length=26499 Score = 98.7 bits (108), Expect = 2e-15 Identities = 154/218 (71%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 43984 CAAGCGTCGACATCGGAGTTGTACGGAAAGGTTCAGGAGATTCCTCAAACAGAAAGGACT 44043 || || || ||||| ||| | ||||| || || ||| | |||||| | |||| || Sbjct 11299 CAGGCTTCTACATCCGAGCTATACGGCAAAGTCATGGAAACTCCTCAGAGTGAAACAACG 11358 Query 44044 CCGTTTTATCCCCGGAGTCCATATGGTGTGGCGAAGCTATATGCCTATTGGATTTGTAAA 44103 |||||||| || || ||||||||| ||||||||||| || ||||||||| Sbjct 11359 CCGTTTTACCCGCGATCGCCATATGGTTGTGCGAAGCTATACGCATATTGGATTGTGGTC 11418 Query 44104 AATTATCGCGAGTCGTATGGGATGTTCGTTTGTAATTCGATTTGTTTCAATCACGAAAGT 44163 |||||| | ||| ||||||| ||| || ||||| ||| | ||||| |||||||| Sbjct 11419 AATTATAGGGAGGCGTATGGCGTGTACGCGTGTAACGGGATCTTGTTCAACCACGAAAGC 11478 Query 44164 CCCAACAGA-GGTCATCAGTTCGTGACTCGTAAAATCA 44200 || | ||| || | || |||||||| | || |||| Sbjct 11479 CCAAGGAGAGGGAGAACA-TTCGTGACAAGGAAGATCA 11515 >seq178676 Length=5582 Score = 95.1 bits (104), Expect = 3e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 ||||||||||| |||||||| || || ||| | ||||| |||||||| | || || || Sbjct 4513 CCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGACGACTCCACCTCT 4454 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || ||||||||||| ||||| | ||||| ||||| || ||||| || Sbjct 4453 AGGGTGATCGTCTTTCCCGTGAGGGTCTTGACGAAAATTTGCATCTT 4407 >seq31532 Length=94 Score = 89.7 bits (98), Expect = 1e-12 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| || || ||| | ||||| ||||| |||| ||||| ||||||||||| ||||| Sbjct 2 ATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGACCTCGAGAGTGATGGTCTTG 61 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| ||||| ||||| |||||||| Sbjct 62 CCTGTCAAGGTCTTGACGAAGATCTGCAT 90 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1044291776879806