Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq174905 132 5e-26 >seq174905 Length=21728 Score = 132 bits (146), Expect = 5e-26 Identities = 365/557 (66%), Gaps = 3/557 (1%) Strand=Plus/Plus Query 23509 CATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAAT 23568 || || ||||| ||| | || ||||| | || || | |||||| ||||||||||| Sbjct 14670 CAGGCGAAATCGGTATGCATTCCCTCATCTCGGCTGATGAGTTCATTTGAAAATGTTAAG 14729 Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAA 23628 || ||||| | || || || || ||||||||||||| ||| || || || || ||||| Sbjct 14730 CCAGGCATGAGCCCCCGCTTCTTTATCCAAAATATTGAAGCGAACGAGCCAGAGAAGAAG 14789 Query 23629 ATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAA 23688 || || || || || ||||| || || ||||| | ||||||| | | ||||| Sbjct 14790 ATGCCTTCGACCGCGGCAAAAGCGACTAGACGCTCAGCAAATGTGGAGCCTTCGTCAGAT 14849 Query 23689 ATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTT 23748 ||||| || | ||| | |||||| || | || |||||| || || || | Sbjct 14850 ATCCACTTGAGGGCCCATTCAGCCTTGCGCTTGATGCAAGGAATTGTCTCTATGGCGTCA 14909 Query 23749 AAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATT 23808 || ||| | | ||| | || | || || || || || || | ||| | Sbjct 14910 AATAGATACTCTCTTTGATTTGGGTCCTTGATGTAGGTGTCGATGAGAAGGGAATAGGTC 14969 Query 23809 TCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAAT 23868 || | || | || || || ||| ||||||||||| ||||| | ||||| | | | Sbjct 14970 TCTGCGTGGACGTTCTCCATCATAATTTGAAACCCATAGAAACAGCGTGCTTCGGCGACT 15029 Query 23869 TGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCA 23928 || || || || | || | || | | | |||||| || || ||||| ||| ||| ||| Sbjct 15030 TGTACTTCGTTGGAGAAACGTTGAACAAGATTTTCATTGACGATACCGTCAGAAGCGGCA 15089 Query 23929 AAGAAAGCAAGAACATATTTTATAAAATGTCTTTCAT--CAGTTGATAAT-TTTTTCCAA 23985 ||||| ||||| | | | |||||||| | ||| | ||| | | | || ||||| Sbjct 15090 AAGAAGGCAAGGATGTGTGAAATAAAATGGCGTTCGTTGTCGTTTAGATTGTTGTTCCAG 15149 Query 23986 TCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGC 24045 || | | || | |||||||| | ||| ||| | |||||||| |||| || | Sbjct 15150 TCCATTAGGTCGTGAGATAAATCCAGTTCTTCAGCAGTCCAAAATGATGCCTCCGCCTTC 15209 Query 24046 TTATACATTAGCCAAAT 24062 || ||||| |||| || Sbjct 15210 TTGTACATCTGCCAGAT 15226 Score = 98.7 bits (108), Expect = 1e-15 Identities = 325/504 (64%), Gaps = 5/504 (1%) Strand=Plus/Minus Query 23530 CCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTT 23589 || ||||| | ||| || | || || || || || || || ||||| | ||| || || Sbjct 16840 CCCTCATCGCGACTGATGAGCTCGTTGGAGAAGGTCAAGCCGGGCATCATTCCACGCTTC 16781 Query 23590 TTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAG 23649 || ||||| || || | || || || || ||||||||||| |||||||| || |||||| Sbjct 16780 TTCATCCAGAAGATGGATGCGAACGACCCAGAAAAGAAAATCCCCTCAACGGCGGCAAAG 16721 Query 23650 GCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTA 23709 || ||||| ||| ||| || || | | | | || || ||||| || | ||| | | Sbjct 16720 GCGACAAGGCGTTCACCGAAAGTGGAACTCTGGTCGGAGATCCACTTGAGGGCCCAGTCA 16661 Query 23710 GCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCA 23769 ||||| ||| | || ||| ||||||| || | || || || || | Sbjct 16660 GCCTTGCGTTTGATGCAGGGAATGGTTTCAACAGCGTCGAACAGGAAGTCGCGTTGAGCG 16601 Query 23770 TTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATA 23829 ||| | || || || || || || | | || |||| || || || ||||| || Sbjct 16600 GGCTCTTTGATGTACGTGTCGATGAGGAGAGAGTAGGTTTCGGAGTGGATGTTTTCCATC 16541 Query 23830 GCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTT 23889 |||||| || ||||| || || | ||| || | ||| || ||| | || | | Sbjct 16540 ATAATCTGGAAGCCATAGAAGCAACGAGCCTCGGCGGCTTGTACTTCACCGGAGAAGCGT 16481 Query 23890 TTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTT 23949 | | ||||| || || ||||| ||| || || |||||||| ||||| | | Sbjct 16480 TCGAGAAGGTTTTCATTGACGATACCGTCAGACGCCGCGAAGAAAGCGAGAACGTGTGAA 16421 Query 23950 ATAAAATGTCTTTCATCAGTTGATAA----TTTTTTCCAATCATTAATATCTTTTGATAA 24005 || || || | || | || | | | || ||||| |||| || ||| || || | Sbjct 16420 ATGAAGTGGCGCTCGT-TGTCGTTCAGGCGGTTGTTCCAGTCATGAAGATCCTTCGAGAG 16362 Query 24006 ATCAACTTCATCAACTGTCCAAAA 24029 ||| | || ||| ||||||| || Sbjct 16361 ATCCATCTCTTCAGCTGTCCAGAA 16338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 520298427204600