Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq181137 145 5e-30 seq173931 84.2 2e-11 >seq181137 Length=58212 Score = 145 bits (160), Expect = 5e-30 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 44135 TGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGC 44194 ||||| || |||||| ||||| || ||||| | || || | || |||| |||| Sbjct 1411 TGAAGAGTCGACTCCTTCTGGATATTATAATCCGAAAGGGTACGACCATCCTCCAACTGC 1470 Query 44195 TTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTC 44254 |||||||| ||||| | ||| |||||||| | ||| | |||||||| ||| |||||| Sbjct 1471 TTCCCGGCGAAGATGAGACGTTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTC 1530 Query 44255 TGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTG 44314 ||||| | | |||||||| | || |||||||||| ||| |||||||| |||||| Sbjct 1531 GCCTTCACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAGCGTGATCGTCTTGCCCGTG 1590 Query 44315 AGGGTCTTCACGAAGATTTGCAT 44337 |||||||| |||||||| ||||| Sbjct 1591 AGGGTCTTGACGAAGATCTGCAT 1613 Score = 134 bits (148), Expect = 1e-26 Identities = 158/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || ||||| || |||||| ||||||||||| |||| | || |||| || Sbjct 1861 ACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGATAAGGTACGGCCGTCTTCG 1920 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||||||||||||||| | ||||||||| |||| || | ||| ||||| || Sbjct 1921 AGCTGCTTCCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGA 1980 Query 44249 ATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||||| | ||| | ||||| || | || |||||||| | || || ||||| Sbjct 1981 ATCTT-TGCTTTCACGTTGTCAATGGTATCCGAAGACTCCACCTCAAGAGTGATGGTCTT 2039 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||||||||||| || ||||| |||||| Sbjct 2040 GCCCGTGAGGGTCTTAACAAAGATCTGCATG 2070 Score = 125 bits (138), Expect = 5e-24 Identities = 167/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || | ||| | | || || || || || ||| || || ||||||||||| Sbjct 1611 CATTCCACCACGCAGACGAAGGACGAGATGGAGAGTCGACTCTTTCTGAATGTTGTAATC 1670 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || || |||||||| ||||| ||||| | ||| || || |||| Sbjct 1671 AGAAAGGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATAAGACGTTGTTGGTCTGG 1730 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | || ||||| ||| |||||| ||||| | | |||||||| | ||| || Sbjct 1731 GGGGATGCCCTCCTTATCCTGGATCTTCGCCTTCACATTATCGATGGTGTCAGAGGACTC 1790 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||| | || |||||||| || ||||||||||| |||||||| |||||| Sbjct 1791 CACCTCGAGGGTGATCGTCTTCCCTGTGAGGGTCTTGACGAAGATCTGCATG 1842 >seq173931 Length=6298 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 |||||||||||| || || |||||| ||||||||||| ||| ||| ||| | || Sbjct 5720 CAACACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGACCATC 5661 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || |||||||| || |||||||||| ||| |||||||| Sbjct 5660 TTCGAGCTGCTTTCCAGCAAAGATCAGACGTTGCTGATC 5622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359189750863713