Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq181137 138 1e-27 seq176134 89.7 5e-13 seq179408 87.8 2e-12 seq179407 87.8 2e-12 seq178676 87.8 2e-12 seq173931 84.2 2e-11 seq92635 82.4 7e-11 >seq181137 Length=58212 Score = 138 bits (152), Expect = 1e-27 Identities = 170/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | || ||||| || || ||||||||| ||||| |||||||| Sbjct 1842 GCCACCACGCAGACGGAGGACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGA 1901 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | ||| || |||| ||||||||||| ||||| || || || ||||| ||||| | ||| Sbjct 1902 TAAGGTACGGCCGTCTTCGAGCTGCTTCCCGGCAAAGATAAGACGCTGCTGGTCTGGGGG 1961 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || | |||||||| | ||| | ||||||| ||| | | | || || ||||||| Sbjct 1962 AATACCCTCCTTGT-CTTGAATCTTTGCTTTCACGTTGTCAATGGTATCCGAAGACTCCA 2020 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | || || || || ||||| || ||||| || || ||||||||| Sbjct 2021 CCTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTAACAAAGATCTGCATG 2070 Score = 134 bits (148), Expect = 1e-26 Identities = 170/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || ||||| || || ||| ||||||||||| || || || Sbjct 1615 CCACCACGCAGACGAAGGACGAGATGGAGAGTCGACTCTTTCTGAATGTTGTAATCAGAA 1674 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || |||||||||||||||||||| || || || |||||||| | ||| Sbjct 1675 AGGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATAAGACGTTGTTGGTCTGGGGGG 1734 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGA-CGACACAGTGTCGCTCGACTCCA 41813 | || |||||| ||| ||| || ||||| | | || | ||||| ||||||| Sbjct 1735 ATGCCCTCCTTATCCTGGATCTTCGCCTTCACATTATCG--ATGGTGTCAGAGGACTCCA 1792 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | || ||||| || || || || ||||| ||||| ||||||||| Sbjct 1793 CCTCGAGGGTGATCGTCTTCCCTGTGAGGGTCTTGACGAAGATCTGCATG 1842 Score = 118 bits (130), Expect = 1e-21 Identities = 153/209 (73%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 41655 CCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGA 41714 ||| ||| || || ||||||||| || ||||| || || ||||| || | || || | Sbjct 1406 CCAAATGAAGAGTCGACTCCTTCTGGATATTATAATCCGAAAGGGTACGACCATCCTCCA 1465 Query 41715 GCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGA 41774 |||||| |||||||| || || || || || || | |||| || ||||||||| || Sbjct 1466 ACTGCTTCCCGGCGAAGATGAGACGTTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGA 1525 Query 41775 TTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 | || ||||| || | | | ||||| ||||||||||||| ||| ||||| || Sbjct 1526 TCTTCGCCTTCA-CGTTGTCGATGGTGTCCGAAGACTCCACCTCCAGCGTGATCGTCTTG 1584 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || ||||| ||||| |||||||| Sbjct 1585 CCCGTGAGGGTCTTGACGAAGATCTGCAT 1613 Score = 91.5 bits (100), Expect = 1e-13 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| || ||||| | || || || || ||| ||||||||| |||||||||||||| Sbjct 2070 GCCGCCACGGAGACGGAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGA 2129 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATC 41734 |||||| || | || || ||||||||||| ||||| ||| Sbjct 2130 GAGGGTACGTCCATCCTCAAGCTGCTTGCCAGCGAAGATC 2169 Score = 91.5 bits (100), Expect = 1e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | || || || || ||| ||||||||| ||||| || || ||| Sbjct 2294 CCGCCACGGAGACGAAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAATCCGAG 2353 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC 41748 || ||||| | || || ||||||||||| ||||| |||| |||||| ||||| Sbjct 2354 AGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTC 2406 >seq176134 Length=3119 Score = 89.7 bits (98), Expect = 5e-13 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 41668 GCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGC 41727 |||||||||||||||||| ||||| || || ||||| |||| ||||||||||| || || Sbjct 3119 GCTCTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGACCGTCCTCGAGCTGCTTTCCAGC 3060 Query 41728 GAATATCAGGCGCTGTTGGTCCGCGGGAA 41756 ||| |||| ||||| ||||| | |||| Sbjct 3059 GAAGATCAAACGCTGCTGGTCGGGAGGAA 3031 >seq179408 Length=3068 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| |||| ||| ||||||||| ||||||||||| || ||||| || | || ||| Sbjct 2870 ACCAAGTGCAAAGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTTCGGCCATCCTCG 2929 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| |||||||| || || ||||| ||||| | ||| Sbjct 2930 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGGGG 2970 >seq179407 Length=3065 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| |||| ||| ||||||||| ||||||||||| || ||||| || | || ||| Sbjct 2867 ACCAAGTGCAAAGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTTCGGCCATCCTCG 2926 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| |||||||| || || ||||| ||||| | ||| Sbjct 2927 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGGGG 2967 >seq178676 Length=5582 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| |||| ||| ||||||||| ||||||||||| || ||||| || | || ||| Sbjct 4682 ACCAAGTGCAAAGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTTCGGCCATCCTCG 4623 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| |||||||| || || ||||| ||||| | ||| Sbjct 4622 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGGGG 4582 >seq173931 Length=6298 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| |||||||| || || || ||||||||| ||||| |||||| | Sbjct 5734 CCACCACGAAGACGCAACACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTG 5675 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| | || ||||||||||| || || || ||||| || || || || | ||| Sbjct 5674 AGAGTGCGACCATCTTCGAGCTGCTTTCCAGCAAAGATCAGACGTTGCTGATCGGGGGG 5616 >seq92635 Length=68 Score = 82.4 bits (90), Expect = 7e-11 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 41668 GCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGC 41727 |||||||||||||||||| ||||| || |||||||| | || ||||||||||| ||||| Sbjct 68 GCTCTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGACCATCCTCGAGCTGCTTCCCGGC 9 Query 41728 GAATATCA 41735 ||| |||| Sbjct 8 GAAGATCA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461249432566800