Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq41 122 2e-22 seq1022 86.0 1e-11 seq2676 84.2 5e-11 >seq41 Length=11186 Score = 122 bits (134), Expect = 2e-22 Identities = 136/179 (76%), Gaps = 2/179 (1%) Strand=Plus/Minus Query 230414 AGGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACTTATG 230472 |||||||| | |||||| | || ||||| || || ||||||||||| | || ||| Sbjct 4242 AGGAGTTCCTGACGGACGCTCTGCCC-GTCGCGCTCATCGGCATGAACGCCAAGCTCATG 4184 Query 230473 GGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTG 230532 | ||||||||||| ||||| ||||||||| | | || || || || ||||||| Sbjct 4183 TGCCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCGTCGCCCTCGGCAACGAGAAGTAC 4124 Query 230533 TACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAA 230591 |||||||| | ||||||||| | || |||||| | ||||| || |||||||||||||| Sbjct 4123 TACAACTCCACGAACCCCTTCGACTTCATGGAGATGATTTCCCTGCAAGGGAAGACCAA 4065 >seq1022 Length=5517 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165919 CTTAGCTCAGTTGGAAGAGTTTTTGCCTAACACGCAGAAGGTCGCAGGATCGAAACCTGC 165978 |||| ||||||||| ||||| ||||| ||||||||| || ||||||||||||| ||||| Sbjct 5507 CTTAACTCAGTTGGTAGAGTGTTTGCTTAACACGCAAAATGTCGCAGGATCGAGCCCTGC 5448 Query 165979 AGGGATCATATT 165990 || | ||||||| Sbjct 5447 AGTGGTCATATT 5436 >seq2676 Length=14567 Score = 84.2 bits (92), Expect = 5e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 165919 CTTAGCTCAGTTGGAAGAGTTTTTGCCTAACACGCAGAAGGTCGCAGGATCGAAACCTGC 165978 |||| ||||||||| ||||| ||||| ||||||||| || ||||||||||||| ||||| Sbjct 13881 CTTAACTCAGTTGGTAGAGTGTTTGCTTAACACGCAAAATGTCGCAGGATCGAGCCCTGC 13822 Query 165979 AGGGATCATATTTT 165992 || | |||| |||| Sbjct 13821 AGTGGTCATGTTTT 13808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057783448316960