Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq41 232 7e-56 seq2870 132 5e-26 seq305 125 7e-24 seq2900 98.7 1e-15 seq2247 96.9 4e-15 seq278 87.8 2e-12 >seq41 Length=11186 Score = 232 bits (256), Expect = 7e-56 Identities = 192/234 (82%), Gaps = 3/234 (1%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||||||||||||||||| |||||| |||||||| Sbjct 5269 ATCTGGCAGATGTACAAGAAGGCCGAGGCGTCGTTCTGGACCGCGGAGGAGATGGACCTG 5210 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTG---AACGACAACGAGCGCCATTTCATCAAG 116752 |||||||||| | ||||||| || | | ||||||||||||||||| |||||| Sbjct 5209 TCCAAGGACATGCACGACTGGCAGAACAAGCTCAACGACAACGAGCGCCACTTCATCTCC 5150 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 |||||||| ||||| |||||||| ||||||||||||||||||||| || ||||||| Sbjct 5149 CACGTGCTCGCCTTCTTCGCCGCGTCCGACGGCATCGTCAACGAGAACCTCCTCGAGCGC 5090 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATC 116866 ||| | ||||| ||||| |||||||| || |||||||| ||||| |||||| Sbjct 5089 TTCTCCGGCGAGGTCCAGGTCGCCGAGGCCCGCTGCTTCTATGGCTTCCAGATC 5036 Score = 93.3 bits (102), Expect = 4e-14 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 117086 TTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAAC 117145 ||||| |||| || ||||| ||||| || ||||||||||||||||| || ||| || Sbjct 4554 TTCGCGTCCATCTTCTGGCTTAAGAAGCGTGGCCTCATGCCCGGCCTTACCTTCTCGAAT 4495 Query 117146 GAGCTCATCTCCAGGGACGAGGGTCTGCA 117174 |||||||||||| | |||||||||||||| Sbjct 4494 GAGCTCATCTCCCGCGACGAGGGTCTGCA 4466 >seq2870 Length=12576 Score = 132 bits (146), Expect = 5e-26 Identities = 146/192 (76%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 40708 ACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCT 40766 || ||||| ||||| |||||||| |||| ||||| || | |||| | | |||| | Sbjct 10059 ACCCTCACAGGCAAGACCATCACGCTCGAGGTCGAGTCCTCGGACACGATCGACAACG-T 10001 Query 40767 CAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGC 40826 ||||| || |||| ||||| ||||||||||| | |||||||| || | |||| ||| Sbjct 10000 CAAGGCCAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAGCAGCGCTTGATCTTCGC 9941 Query 40827 GGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCAC 40886 ||||| ||||| || |||| || |||||| ||||||||||| ||||||||| | || Sbjct 9940 TGGCAAGCAGCTTGAGGACGGCCGGACCCTCTCGGACTACAACATTCAGAAGGAGTCGAC 9881 Query 40887 GCTGCATCTAGT 40898 ||| ||||| || Sbjct 9880 GCTCCATCTCGT 9869 Score = 123 bits (136), Expect = 3e-23 Identities = 144/192 (75%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 40708 ACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCT 40766 || ||||| |||||||||||||| |||| || || || | |||| | | |||| | Sbjct 9769 ACCCTCACCGGCAAAACCATCACGCTCGAGGTTGAGTCCTCGGACACGATCGACAACG-T 9711 Query 40767 CAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGC 40826 ||||| || || | ||||| |||||||||||| | |||||||| || | |||| ||| Sbjct 9710 CAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCTTGATCTTCGC 9651 Query 40827 GGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCAC 40886 ||||| ||||| || |||| || |||||| ||||||||||||||||| || | || Sbjct 9650 TGGCAAGCAGCTTGAGGACGGCCGGACCCTCTCGGACTACAACATCCAGAAAGAATCGAC 9591 Query 40887 GCTGCATCTAGT 40898 ||| || || || Sbjct 9590 GCTCCACCTCGT 9579 >seq305 Length=9259 Score = 125 bits (138), Expect = 7e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 40708 ACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCT 40766 || ||||| ||||| || ||||| |||| ||||| || | |||| | | |||| | Sbjct 8076 ACCCTCACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGACACGATCGACAACG-T 8018 Query 40767 CAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGC 40826 ||||| || || | ||||| || || ||||| | |||||||| || ||||||| ||| Sbjct 8017 CAAGGCCAAGATCCAGGACAAGGAAGGTATCCCGCCCGACCAGCAGCGCCTCATCTTCGC 7958 Query 40827 GGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCAC 40886 ||||| ||||| || |||| |||||||| ||||||||||||||||||||| | || Sbjct 7957 TGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGAC 7898 Query 40887 GCTGCATCTAGTGTTGCG 40904 ||| || || || |||| Sbjct 7897 GCTCCACCTCGTCCTGCG 7880 >seq2900 Length=32347 Score = 98.7 bits (108), Expect = 1e-15 Identities = 111/146 (76%), Gaps = 2/146 (1%) Strand=Plus/Minus Query 40708 ACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGT-GCAAACGCT 40766 || ||||||||||| ||||||||| |||| || || | | |||| | | | |||| | Sbjct 25987 ACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCGGACACCATCGACAACG-T 25929 Query 40767 CAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGC 40826 ||||| ||| || | ||||| ||||| |||||| | |||||||| || ||||||| || Sbjct 25928 CAAGGCAAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGCCTCATCTTTGC 25869 Query 40827 GGGCAAACAGCTGGACGACGAGCGCA 40852 ||||| ||||| || |||| |||| Sbjct 25868 CGGCAAGCAGCTCGAGGACGGCCGCA 25843 >seq2247 Length=21484 Score = 96.9 bits (106), Expect = 4e-15 Identities = 116/155 (75%), Gaps = 2/155 (1%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || ||||| || || |||||| |||| || || | |||||| | | Sbjct 11454 TTCGTCAAGACCCTGACGGGTAAGACGATCACCCTCGAGGTGGAGTCTTCCGACACCATC 11513 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| |||||| || || | ||||| |||||||||||| | |||||||| || || Sbjct 11514 GACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGCCT 11572 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCA 40852 |||| ||| ||||| ||||| || |||| |||| Sbjct 11573 GATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCA 11607 >seq278 Length=9506 Score = 87.8 bits (96), Expect = 2e-12 Identities = 108/148 (73%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 40708 ACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTC 40767 || ||||| ||||| |||||||| |||| ||||| || | |||| | | | || Sbjct 9359 ACCCTCACCGGCAAGACCATCACGCTCGAGGTCGAGTCCTCGGACACGATCGACAATGTC 9418 Query 40768 AAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCG 40827 |||| || || | ||||| |||||||||||| | |||||||| || | |||| ||| Sbjct 9419 AAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCTTGATCTTCGCT 9478 Query 40828 GGCAAACAGCTGGACGACGAGCGCACCC 40855 ||||| ||||| || |||| || |||| Sbjct 9479 GGCAAGCAGCTTGAGGACGGCCGGACCC 9506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515199930801920