Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01-
21] 2,992 sequences; 32,128,072 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq41 232 7e-56
seq2870 132 5e-26
seq305 125 7e-24
seq2900 98.7 1e-15
seq2247 96.9 4e-15
seq278 87.8 2e-12
>seq41
Length=11186
Score = 232 bits (256), Expect = 7e-56
Identities = 192/234 (82%), Gaps = 3/234 (1%)
Strand=Plus/Minus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||||||||||||||||||||||| |||||| ||||||||
Sbjct 5269 ATCTGGCAGATGTACAAGAAGGCCGAGGCGTCGTTCTGGACCGCGGAGGAGATGGACCTG 5210
Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTG---AACGACAACGAGCGCCATTTCATCAAG 116752
|||||||||| | ||||||| || | | ||||||||||||||||| ||||||
Sbjct 5209 TCCAAGGACATGCACGACTGGCAGAACAAGCTCAACGACAACGAGCGCCACTTCATCTCC 5150
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
|||||||| ||||| |||||||| ||||||||||||||||||||| || |||||||
Sbjct 5149 CACGTGCTCGCCTTCTTCGCCGCGTCCGACGGCATCGTCAACGAGAACCTCCTCGAGCGC 5090
Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATC 116866
||| | ||||| ||||| |||||||| || |||||||| ||||| ||||||
Sbjct 5089 TTCTCCGGCGAGGTCCAGGTCGCCGAGGCCCGCTGCTTCTATGGCTTCCAGATC 5036
Score = 93.3 bits (102), Expect = 4e-14
Identities = 74/89 (83%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 117086 TTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAAC 117145
||||| |||| || ||||| ||||| || ||||||||||||||||| || ||| ||
Sbjct 4554 TTCGCGTCCATCTTCTGGCTTAAGAAGCGTGGCCTCATGCCCGGCCTTACCTTCTCGAAT 4495
Query 117146 GAGCTCATCTCCAGGGACGAGGGTCTGCA 117174
|||||||||||| | ||||||||||||||
Sbjct 4494 GAGCTCATCTCCCGCGACGAGGGTCTGCA 4466
>seq2870
Length=12576
Score = 132 bits (146), Expect = 5e-26
Identities = 146/192 (76%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 40708 ACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCT 40766
|| ||||| ||||| |||||||| |||| ||||| || | |||| | | |||| |
Sbjct 10059 ACCCTCACAGGCAAGACCATCACGCTCGAGGTCGAGTCCTCGGACACGATCGACAACG-T 10001
Query 40767 CAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGC 40826
||||| || |||| ||||| ||||||||||| | |||||||| || | |||| |||
Sbjct 10000 CAAGGCCAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAGCAGCGCTTGATCTTCGC 9941
Query 40827 GGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCAC 40886
||||| ||||| || |||| || |||||| ||||||||||| ||||||||| | ||
Sbjct 9940 TGGCAAGCAGCTTGAGGACGGCCGGACCCTCTCGGACTACAACATTCAGAAGGAGTCGAC 9881
Query 40887 GCTGCATCTAGT 40898
||| ||||| ||
Sbjct 9880 GCTCCATCTCGT 9869
Score = 123 bits (136), Expect = 3e-23
Identities = 144/192 (75%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 40708 ACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCT 40766
|| ||||| |||||||||||||| |||| || || || | |||| | | |||| |
Sbjct 9769 ACCCTCACCGGCAAAACCATCACGCTCGAGGTTGAGTCCTCGGACACGATCGACAACG-T 9711
Query 40767 CAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGC 40826
||||| || || | ||||| |||||||||||| | |||||||| || | |||| |||
Sbjct 9710 CAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCTTGATCTTCGC 9651
Query 40827 GGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCAC 40886
||||| ||||| || |||| || |||||| ||||||||||||||||| || | ||
Sbjct 9650 TGGCAAGCAGCTTGAGGACGGCCGGACCCTCTCGGACTACAACATCCAGAAAGAATCGAC 9591
Query 40887 GCTGCATCTAGT 40898
||| || || ||
Sbjct 9590 GCTCCACCTCGT 9579
>seq305
Length=9259
Score = 125 bits (138), Expect = 7e-24
Identities = 148/198 (75%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 40708 ACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCT 40766
|| ||||| ||||| || ||||| |||| ||||| || | |||| | | |||| |
Sbjct 8076 ACCCTCACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGACACGATCGACAACG-T 8018
Query 40767 CAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGC 40826
||||| || || | ||||| || || ||||| | |||||||| || ||||||| |||
Sbjct 8017 CAAGGCCAAGATCCAGGACAAGGAAGGTATCCCGCCCGACCAGCAGCGCCTCATCTTCGC 7958
Query 40827 GGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCAC 40886
||||| ||||| || |||| |||||||| ||||||||||||||||||||| | ||
Sbjct 7957 TGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGAC 7898
Query 40887 GCTGCATCTAGTGTTGCG 40904
||| || || || ||||
Sbjct 7897 GCTCCACCTCGTCCTGCG 7880
>seq2900
Length=32347
Score = 98.7 bits (108), Expect = 1e-15
Identities = 111/146 (76%), Gaps = 2/146 (1%)
Strand=Plus/Minus
Query 40708 ACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGT-GCAAACGCT 40766
|| ||||||||||| ||||||||| |||| || || | | |||| | | | |||| |
Sbjct 25987 ACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCGGACACCATCGACAACG-T 25929
Query 40767 CAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGC 40826
||||| ||| || | ||||| ||||| |||||| | |||||||| || ||||||| ||
Sbjct 25928 CAAGGCAAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGCCTCATCTTTGC 25869
Query 40827 GGGCAAACAGCTGGACGACGAGCGCA 40852
||||| ||||| || |||| ||||
Sbjct 25868 CGGCAAGCAGCTCGAGGACGGCCGCA 25843
>seq2247
Length=21484
Score = 96.9 bits (106), Expect = 4e-15
Identities = 116/155 (75%), Gaps = 2/155 (1%)
Strand=Plus/Plus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || || ||||| || || |||||| |||| || || | |||||| | |
Sbjct 11454 TTCGTCAAGACCCTGACGGGTAAGACGATCACCCTCGAGGTGGAGTCTTCCGACACCATC 11513
Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817
| |||| |||||| || || | ||||| |||||||||||| | |||||||| || ||
Sbjct 11514 GACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGCCT 11572
Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCA 40852
|||| ||| ||||| ||||| || |||| ||||
Sbjct 11573 GATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCA 11607
>seq278
Length=9506
Score = 87.8 bits (96), Expect = 2e-12
Identities = 108/148 (73%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 40708 ACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTC 40767
|| ||||| ||||| |||||||| |||| ||||| || | |||| | | | ||
Sbjct 9359 ACCCTCACCGGCAAGACCATCACGCTCGAGGTCGAGTCCTCGGACACGATCGACAATGTC 9418
Query 40768 AAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCG 40827
|||| || || | ||||| |||||||||||| | |||||||| || | |||| |||
Sbjct 9419 AAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCTTGATCTTCGCT 9478
Query 40828 GGCAAACAGCTGGACGACGAGCGCACCC 40855
||||| ||||| || |||| || ||||
Sbjct 9479 GGCAAGCAGCTTGAGGACGGCCGGACCC 9506
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515199930801920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |