Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq305 109 5e-19 seq2870 93.3 4e-14 seq2247 87.8 2e-12 seq2900 86.0 5e-12 seq278 86.0 5e-12 >seq305 Length=9259 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| ||||| | | || || | ||||| || ||||| || || |||||||| || Sbjct 7867 ACCACCGCGGAGACGCAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGA 7926 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 | ||||| ||||||||||| || |||||| ||||||| |||||||| ||||| || Sbjct 7927 AAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGCGG 7986 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 || || |||||||| || || || || | |||| ||||||| | |||||| Sbjct 7987 GATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGAC 8046 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720 ||||| || | ||| |||||||| || || Sbjct 8047 CTCGAGCGTGATCGTCTTGCCGGTGAGGGT 8076 >seq2870 Length=12576 Score = 93.3 bits (102), Expect = 4e-14 Identities = 132/186 (71%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || || ||||| || |||||||| || | || || ||||| ||||| Sbjct 9584 GTGGAGCGTCGATTCTTTCTGGATGTTGTAGTCCGAGAGGGTCCGGCCGTCCTCAAGCTG 9643 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || |||||| |||| | |||||||| ||||| || |||||||||||||| || || Sbjct 9644 CTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTT 9703 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| ||||||| | ||| ||||||| || | ||||||||||| Sbjct 9704 GGCCTTGACGTTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATGGTTTTGCCGGT 9763 Query 118715 CAGAGT 118720 || || Sbjct 9764 GAGGGT 9769 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| || ||||| || ||||||||||| || | || || ||||| ||||| Sbjct 9875 TGGAGCGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGGGTCCGGCCGTCCTCAAGCTGC 9934 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 || |||||| |||| | |||||||| || || || |||||||||||||| ||| || Sbjct 9935 TTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTTG 9994 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 || || | |||| ||||||| | ||||||||||| || | || ||||| || Sbjct 9995 GCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATGGTCTTGCCTGTG 10054 Query 118716 AGAGT 118720 || || Sbjct 10055 AGGGT 10059 >seq2247 Length=21484 Score = 87.8 bits (96), Expect = 2e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 ||||||||||| || |||||| |||| || |||||||| || || || |||||||||||| Sbjct 11599 TCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTG 11540 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703 || || || || || | |||| |||||| | ||| ||||||| ||| | | Sbjct 11539 TCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATC 11480 Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAA 118729 || || || ||||| || || || || Sbjct 11479 GTCTTACCCGTCAGGGTCTTGACGAA 11454 >seq2900 Length=32347 Score = 86.0 bits (94), Expect = 5e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 ||||||||||| || || || ||||||| |||||||| ||||| || || ||||||||| Sbjct 25851 TCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGGATACCCTCCTTG 25910 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703 || || ||| || || | |||| |||||||| ||| ||||||| ||| | Sbjct 25911 TCCTGGATCTTTGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATG 25970 Query 118704 GTTTTGCCGGTCAGAGT 118720 || ||||| || || || Sbjct 25971 GTCTTGCCCGTGAGGGT 25987 >seq278 Length=9506 Score = 86.0 bits (94), Expect = 5e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 ||||| ||||| || |||||| |||| | |||||||| ||||| || |||||||||||| Sbjct 9495 TCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGGGGGATGCCCTCCTTG 9436 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703 || || || || || | |||| ||||||| | ||||||||||| || | Sbjct 9435 TCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATG 9376 Query 118704 GTTTTGCCGGTCAGAGT 118720 || |||||||| || || Sbjct 9375 GTCTTGCCGGTGAGGGT 9359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433814580374464