Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq2522 89.7 1e-12 seq41 84.2 5e-11 >seq2522 Length=16562 Score = 89.7 bits (98), Expect = 1e-12 Identities = 97/127 (76%), Gaps = 4/127 (3%) Strand=Plus/Plus Query 254205 CCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCC 254264 ||||| || ||| |||| ||||| ||||| ||||||| ||||||| |||||||||||| Sbjct 9220 CCGCCCTTTAAGATCGTCATCCTCGACGAAGCGGACAGCATGACGCAGGACGCGCAGTCC 9279 Query 254265 GCCCTCCGCCGAACGATGGAGACG--CACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCA 254322 || || | || |||||||||||| | || | |||||| || || |||| |||| Sbjct 9280 GCGCTGAGGCGGACGATGGAGACGTTTAGTCGG--ACGACGCGGTTCTGTTTGGTTTGCA 9337 Query 254323 ACTACGT 254329 |||| || Sbjct 9338 ACTATGT 9344 >seq41 Length=11186 Score = 84.2 bits (92), Expect = 5e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 157286 TTGGTCTTTCCCTGGAGAGAAATCATGTCCATCCACTCGAATGGGTTGGCGCAGTTGTAC 157345 |||||||| || || || |||||||| ||||| | ||||| ||||| | | ||||||| Sbjct 4065 TTGGTCTTCCCTTGCAGGGAAATCATCTCCATGAAGTCGAAGGGGTTCGTGGAGTTGTAG 4124 Query 157346 ACCTTGTCGTACCCCAGCTGGTTCAGCCAGTAGTCCGCCACAAACTTGATGTACTCTGTC 157405 ||| |||| || || | ||| | ||| || || |||| |||||||| | Sbjct 4125 TACTTCTCGTTGCCGAGGGCGACGAGCAGGCGGTCGGCGACGAACTCGATGTACTGGCAC 4184 Query 157406 ATGCTCTTCTCGCTGATACCGATGAGCGCGACGGGAAGCGC 157446 ||| ||| || | || ||||||||||||||||| || || Sbjct 4185 ATGAGCTTGGCGTTCATGCCGATGAGCGCGACGGGCAGAGC 4225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073725237165056