Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01-
21] 2,992 sequences; 32,128,072 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq2364 96.9 3e-15
>seq2364
Length=19119
Score = 96.9 bits (106), Expect = 3e-15
Identities = 144/199 (72%), Gaps = 8/199 (4%)
Strand=Plus/Minus
Query 21165 GCGGGGTTCCACGCGCACATAACGATGCGCCGATC-GTGGGG--CCGCCTGTTAAT-TAG 21220
|| |||||||| |||| || || ||| | |||||| || ||| | ||| | | | |
Sbjct 17433 GCCGGGTTCCAAGCGCTCAAAATGATCCTCCGATCCGTCGGGTTCTCCCTAATCTTCTTG 17374
Query 21221 ATCCACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCT 21280
| | ||| ||| ||||||||||||| |||| || || | || ||| ||||
Sbjct 17373 A-CGACCTCGT---GCAGCTGGTCCACTCCCTTCCCACTATAATCCGCTTCGCACCCCTC 17318
Query 21281 GTACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCG 21340
||| |||||||||| || |||||||||||||| ||||| ||||| ||||| ||||| ||
Sbjct 17317 ATACGCCGCCCCAAAGTGCCTCCACTGGAACCCATACACGGGCCCGAGATCCCCCTCCCG 17258
Query 21341 GCGGTCCCCGAAGCCCTGC 21359
| || ||| | ||||||
Sbjct 17257 CCTGTGCCCCAGCCCCTGC 17239
Score = 82.4 bits (90), Expect = 7e-11
Identities = 123/171 (72%), Gaps = 4/171 (2%)
Strand=Plus/Minus
Query 20931 TCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTG--TGCACAAAGTCTCCCGGGG 20988
|| ||||||| ||||| ||||| ||||| |||||| || || || | || || |
Sbjct 17764 TCGACGTGGTCTTTGTACACGTGCGCGTC-CCCAAGCTGGATG-ACGAGCTCGTGCGCGT 17707
Query 20989 TCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048
| | | |||| || |||| || | ||||||||||| |||| |||||||| || |
Sbjct 17706 CCGTGTCGGTGATATGCGCGAGCATGTGCGTCAGGAGGGAGTAGGACGCGATGTTGAATG 17647
Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCT 21099
||| ||||| || | ||| ||||| | |||||| || ||||||| ||||
Sbjct 17646 GGATGCCGAGCCCGAGGTCCGCGGAGCGCTGGTAGAGGAGGCAGGAGAGCT 17596
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427760401148160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |