Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq2364 96.9 3e-15 >seq2364 Length=19119 Score = 96.9 bits (106), Expect = 3e-15 Identities = 144/199 (72%), Gaps = 8/199 (4%) Strand=Plus/Minus Query 21165 GCGGGGTTCCACGCGCACATAACGATGCGCCGATC-GTGGGG--CCGCCTGTTAAT-TAG 21220 || |||||||| |||| || || ||| | |||||| || ||| | ||| | | | | Sbjct 17433 GCCGGGTTCCAAGCGCTCAAAATGATCCTCCGATCCGTCGGGTTCTCCCTAATCTTCTTG 17374 Query 21221 ATCCACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCT 21280 | | ||| ||| ||||||||||||| |||| || || | || ||| |||| Sbjct 17373 A-CGACCTCGT---GCAGCTGGTCCACTCCCTTCCCACTATAATCCGCTTCGCACCCCTC 17318 Query 21281 GTACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCG 21340 ||| |||||||||| || |||||||||||||| ||||| ||||| ||||| ||||| || Sbjct 17317 ATACGCCGCCCCAAAGTGCCTCCACTGGAACCCATACACGGGCCCGAGATCCCCCTCCCG 17258 Query 21341 GCGGTCCCCGAAGCCCTGC 21359 | || ||| | |||||| Sbjct 17257 CCTGTGCCCCAGCCCCTGC 17239 Score = 82.4 bits (90), Expect = 7e-11 Identities = 123/171 (72%), Gaps = 4/171 (2%) Strand=Plus/Minus Query 20931 TCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTG--TGCACAAAGTCTCCCGGGG 20988 || ||||||| ||||| ||||| ||||| |||||| || || || | || || | Sbjct 17764 TCGACGTGGTCTTTGTACACGTGCGCGTC-CCCAAGCTGGATG-ACGAGCTCGTGCGCGT 17707 Query 20989 TCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048 | | | |||| || |||| || | ||||||||||| |||| |||||||| || | Sbjct 17706 CCGTGTCGGTGATATGCGCGAGCATGTGCGTCAGGAGGGAGTAGGACGCGATGTTGAATG 17647 Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCT 21099 ||| ||||| || | ||| ||||| | |||||| || ||||||| |||| Sbjct 17646 GGATGCCGAGCCCGAGGTCCGCGGAGCGCTGGTAGAGGAGGCAGGAGAGCT 17596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427760401148160