Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq2869 95.1 9e-15 >seq2869 Length=12581 Score = 95.1 bits (104), Expect = 9e-15 Identities = 133/184 (72%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 33534 CAAATGCGTCAAGATCAAGCTGCGCAAGATACGCATACCAGAGATGGGCGACAAGTTTGC 33593 ||| | ||||||| || ||||| || ||| | || ||| |||||| ||||| || Sbjct 4930 CAAGTTCGTCAAGGTCCGCGTGCGCTCGACGCGCGTGCCGCAGACGGGCGATAAGTTCGC 4989 Query 33594 ATCGT-TCACGGCCCAGAAGGGCACGTGCGGCATGATGTACGACCAGTGGGACATGCCGT 33652 ||| |||||| | ||||||| || |||||| | ||| | |||||||| | Sbjct 4990 GTCGCGTCACGGGC-AGAAGGGGACAATCGGCATCACCTACCGCACCGAAGACATGCCCT 5048 Query 33653 TCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAACCCGCATGCGTTCCCCTCGCGCA 33712 |||| ||||||||||| || ||||| |||||||||| || || |||||||||||| Sbjct 5049 TCACCGCCGACGGCGTCACGCCCGACCTCATCATCAACCCCCACGCCATCCCCTCGCGCA 5108 Query 33713 TGAC 33716 |||| Sbjct 5109 TGAC 5112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356220609941776