Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01-
21] 2,992 sequences; 32,128,072 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq2870 87.8 4e-12
>seq2870
Length=12576
Score = 87.8 bits (96), Expect = 4e-12
Identities = 138/195 (71%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||| | || || || |||||||| || ||||| || || || | |||||
Sbjct 9866 AGGACGAGATGGAGCGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGGGTCCGGCCGTCC 9925
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| || || || ||||| || || | | ||| || ||||| || || || || || |||
Sbjct 9926 TCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 9985
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGT 104526
|||||||| || || || || || | || || | ||| || ||||| || || || ||
Sbjct 9986 TGAATCTTGGCCTTGACGTTGTCGATCGTGTC-CGAGGACTCGACCTCGAGCGTGATGGT 10044
Query 104527 CTTACCAGTAAGTGT 104541
||| || || || ||
Sbjct 10045 CTTGCCTGTGAGGGT 10059
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151354261142336
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |