Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq2870 87.8 4e-12 >seq2870 Length=12576 Score = 87.8 bits (96), Expect = 4e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || || |||||||| || ||||| || || || | ||||| Sbjct 9866 AGGACGAGATGGAGCGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGGGTCCGGCCGTCC 9925 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || ||||| || || | | ||| || ||||| || || || || || ||| Sbjct 9926 TCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 9985 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGT 104526 |||||||| || || || || || | || || | ||| || ||||| || || || || Sbjct 9986 TGAATCTTGGCCTTGACGTTGTCGATCGTGTC-CGAGGACTCGACCTCGAGCGTGATGGT 10044 Query 104527 CTTACCAGTAAGTGT 104541 ||| || || || || Sbjct 10045 CTTGCCTGTGAGGGT 10059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151354261142336