Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq2364 91.5 1e-13 seq2869 89.7 3e-13 >seq2364 Length=19119 Score = 91.5 bits (100), Expect = 1e-13 Identities = 201/296 (68%), Gaps = 4/296 (1%) Strand=Plus/Minus Query 25669 GGGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGATAAGATCCGCG 25728 |||||||| |||| || ||||| | || || ||||| ||||| || | || Sbjct 17430 GGGTTCCAAGCGCTCAAAATGATCCTCCGATCCGTCGGGTTCTCCCTAATCTTCTTGACG 17371 Query 25729 GTGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTG-TACTC 25787 | |||||||| ||||| ||| |||| || || || || || | ||| | Sbjct 17370 ACCTCGTGCAGCTGGTCCACTCCCTTCCCACTATAATCCGCT-TCGCACCCCTCATACGC 17312 Query 25788 TGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTG 25847 || || || | ||||||||||||||| ||||| || || || || || || |||||| Sbjct 17311 CGCCCCAAAGTGCCTCCACTGGAACCCATACACGGGCCCGAGATCCCCCTCCCGCCTGTG 17252 Query 25848 CTCAAAGCCCCT-CTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCC 25906 | | ||||||| ||| |||| || || | || ||||| |||||||||| | | | Sbjct 17251 C-CCCAGCCCCTGCTTCTCCAGGAACTCCTTCGAGCCATTCCCGTCCCAGATGTGAATTC 17193 Query 25907 CCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 25962 |||| | |||||||| | || || ||||| | |||||||| || |||||| Sbjct 17192 CCTTTGCAGAGAGCTCGAGAGCGTCCGTCGACCCCCGCACGAACCATAGGAGCTCC 17137 >seq2869 Length=12581 Score = 89.7 bits (98), Expect = 3e-13 Identities = 110/145 (76%), Gaps = 4/145 (3%) Strand=Plus/Plus Query 44403 AGATGGGCGACAAGTTTGCGTCGT-TCACGGCGCAAAAGGGGACATGCGGAGCCGTCCTG 44461 ||| |||||| ||||| |||||| |||||| ||| ||||||||| ||| | ||| Sbjct 4971 AGACGGGCGATAAGTTCGCGTCGCGTCACGG-GCAGAAGGGGACAATCGGCATCA-CCTA 5028 Query 44462 ACCCAG-GAGGACATGCCCTTCGACAAAAACGGGGTGGTGCCCGACCTCATCATCAACCC 44520 | || || |||||||||||| | |||| || ||||||||||||||||||||| Sbjct 5029 CCGCACCGAAGACATGCCCTTCACCGCCGACGGCGTCACGCCCGACCTCATCATCAACCC 5088 Query 44521 CCACGCCTTTCCCTCCAGGATGACC 44545 ||||||| | ||||| | |||||| Sbjct 5089 CCACGCCATCCCCTCGCGCATGACC 5113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340125196882416