Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq305 120 3e-22 seq2870 111 1e-19 seq2512 84.2 2e-11 seq41 84.2 2e-11 seq278 82.4 7e-11 >seq305 Length=9259 Score = 120 bits (132), Expect = 3e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 130998 TCACCATGAGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTT 131057 ||| || || |||||||| | |||||| || | || | ||||||||||| || ||||| Sbjct 7858 TCAACAAGAACCACCGCGGAGACGCAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTT 7917 Query 131058 GTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTG 131117 ||| || | |||||| |||||| ||||||||||| ||| |||| | |||||||| Sbjct 7918 GTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTG 7977 Query 131118 GTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGT 131177 ||| || ||||| ||||| ||||| ||| || ||||| | || | || || | Sbjct 7978 GTCGGGCGGGATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGA 8037 Query 131178 GGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216 |||||||| |||| || | || || ||||| || || Sbjct 8038 GGACTCGACCTCGAGCGTGATCGTCTTGCCGGTGAGGGT 8076 >seq2870 Length=12576 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | ||| | ||||||||||| ||||||||||| || Sbjct 9851 CCACCACGCAGACGGAGGACGAGATGGAGCGTCGACTCCTTCTGAATGTTGTAGTCCGAG 9910 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || |||||| ||||||||||| ||| |||| || ||||||||||| || ||| Sbjct 9911 AGGGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGCGGG 9970 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | || | || || | |||||||| Sbjct 9971 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 10030 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGT 131216 |||| || | ||| || || || || || Sbjct 10031 TCGAGCGTGATGGTCTTGCCTGTGAGGGT 10059 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||| | ||| || || | || | ||||| || || || |||||||| || Sbjct 9560 GCCGCCGCGAAGACGGAGGACGAGGTGGAGCGTCGATTCTTTCTGGATGTTGTAGTCCGA 9619 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| || |||||| ||||||||||| ||| |||| || ||||||||||| || || Sbjct 9620 GAGGGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGGGG 9679 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| || ||||| | || | || || | |||||| | Sbjct 9680 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCAAC 9739 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGT 131216 |||| || | |||||| ||||| || || Sbjct 9740 CTCGAGCGTGATGGTTTTGCCGGTGAGGGT 9769 >seq2512 Length=16788 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/221 (68%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 145184 GAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCATAGCGAA 145243 || ||||| || ||||||| ||| | ||||| |||| |||| ||||| || Sbjct 5928 GAGTTGCGGAGACCGTGCTGGGCGATCTTGTCCTTGAGCGAGGCCCAGTCCCAAAGGTCG 5987 Query 145244 GTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTGCCTTGA 145303 | ||| | ||| |||||||||||||||| | || ||||| ||| ||||| ||| | Sbjct 5988 GACGGGGTTACGCCCCACATGTCGTACTGGAGAACGCCCTTGCTCGCGGGCGAGCCCTCG 6047 Query 145304 AAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCAGAGCGCCGAAA 145363 |||| ||| ||||| | ||||||||| | |||||| || ||| || Sbjct 6048 TAGGACGAGTACGTGCCCTCGACGATAGCGAGCTCGACAGACGCCTCGAGCGCGGCGTGG 6107 Query 145364 TAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTC 145404 || || |||||| || ||| |||||||| || | ||||| Sbjct 6108 TAGATGGTCTCGAAGATCTGCTTGTTGAGCTGCTTGGCTTC 6148 >seq41 Length=11186 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 46377 GGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAA 46436 ||| | ||| ||| ||||||| | |||| ||| ||||||| || || | |||||||| Sbjct 4256 GGTCGGCATCGAGCAGGAGTTCCTGACGGACGCTCTGCCCGTCGCGCTCATCGGCATGAA 4197 Query 46437 CGCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGT 46487 ||| || |||||| | ||||||||||| || || ||||| |||||||| Sbjct 4196 CGCCAAGCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCGT 4146 >seq278 Length=9506 Score = 82.4 bits (90), Expect = 7e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 131079 GTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTT 131138 |||||| ||||||||||| ||| |||| || ||||||||||| || ||||| || || || Sbjct 9496 GTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGGGGGATGCCCTCCTT 9437 Query 131139 GTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAAC 131198 ||| ||| || ||||| | || | || || | |||||||| |||| || | Sbjct 9436 GTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGAT 9377 Query 131199 GGTTTTACCGGTTAGAGT 131216 ||| || ||||| || || Sbjct 9376 GGTCTTGCCGGTGAGGGT 9359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471995146721280