Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq2870 150 3e-31 seq305 141 2e-28 seq262 127 4e-24 seq2900 122 2e-22 seq2247 116 7e-21 seq1964 93.3 8e-14 seq41 93.3 8e-14 seq223 84.2 4e-11 >seq2870 Length=12576 Score = 150 bits (166), Expect = 3e-31 Identities = 160/211 (76%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || |||||||| || | || | ||| ||||| || ||||| |||||||| || || ||| Sbjct 9561 CCGCCGCGAAGACGGAGGACGAGGTGGAGCGTCGATTCTTTCTGGATGTTGTAGTCCGAG 9620 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || |||| || || || | |||||| || ||||| || | | || |||||||| || Sbjct 9621 AGGGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGGGGG 9680 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| ||||||||| ||||| ||||| | || || || Sbjct 9681 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCAACC 9740 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCT 68445 || | ||||||||||| || |||||||||| Sbjct 9741 TCGAGCGTGATGGTTTTGCCGGTGAGGGTCT 9771 >seq305 Length=9259 Score = 141 bits (156), Expect = 2e-28 Identities = 158/211 (75%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || |||| || | ||| ||||| ||||| || |||||||| || || || Sbjct 7868 CCACCGCGGAGACGCAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAA 7927 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || ||||| ||||| | || |||||||| || Sbjct 7928 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGCGGG 7987 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||||||||| || ||||| ||||||||| ||||| ||||| | || || || Sbjct 7988 ATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 8047 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCT 68445 || | ||||| || || || |||||||||| Sbjct 8048 TCGAGCGTGATCGTCTTGCCGGTGAGGGTCT 8078 >seq262 Length=9618 Score = 127 bits (140), Expect = 4e-24 Identities = 136/180 (76%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 268286 TGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGGCATTTCTGCTTGCCGAGC 268345 |||||||| || ||||| ||||| ||||| || ||||| ||||| | |||||||||||| Sbjct 1860 TGGCCCCAGTCACGCTTGGCGTCGATGTTACCAAGGAAGAGGCACTCCTGCTTGCCGAGG 1801 Query 268346 TTCACGCGTGCAAGACCGCGAGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAGGG 268405 | | || | |||| | ||| || || || |||||||| |||||| | || Sbjct 1800 CTGATTTCCGCGACGGCGCGCGAGATCTTACGTGTGACGAACGTGCGGCCACGGCGGGGA 1741 Query 268406 CTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTC 268465 ||||||||||||||||| || ||| |||| ||||||| || ||||||||||||||| Sbjct 1740 GACTCGTGGTTGAAGAGGACACCATTGGTCGCGTACATGCCGTACGCCTCACGGTAGTTC 1681 >seq2900 Length=32347 Score = 122 bits (134), Expect = 2e-22 Identities = 112/142 (79%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 || || || | |||||| ||||| || ||||| | || |||||||| || || || ||| Sbjct 25848 CCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGGATACCCTCC 25907 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 ||||| || ||||||||||||||| ||||||||||| | || || || || | |||| Sbjct 25908 TTGTCCTGGATCTTTGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGGGTG 25967 Query 68424 ATGGTTTTTCCCGTGAGGGTCT 68445 ||||| || ||||||||||||| Sbjct 25968 ATGGTCTTGCCCGTGAGGGTCT 25989 >seq2247 Length=21484 Score = 116 bits (128), Expect = 7e-21 Identities = 115/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 || || || | |||||| || ||||| || || | || ||||| || || ||||| ||| Sbjct 11602 CCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCC 11543 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 ||||| || ||||| ||||||||| ||||||||||| | || || || || | |||| Sbjct 11542 TTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTG 11483 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || || || ||||| |||||||||||||| Sbjct 11482 ATCGTCTTACCCGTCAGGGTCTTGACGAA 11454 >seq1964 Length=2434 Score = 93.3 bits (102), Expect = 8e-14 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 225511 GATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGAT 225570 ||||||||| |||||| ||||| | |||||| || || ||||| || || || || Sbjct 825 GATGAGCCACTGGACGTTGAGAACGTCGAGGTGGTTGGTTGGCTCGTCGAGGAGGAGAAT 766 Query 225571 GTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAG 225630 ||| || | | |||||||||||| | ||| | |||||||| |||||||| ||||| || Sbjct 765 GTCGGCCTTGAAGAGGATGGCGCGGGCGAGGGCGAGCTTCATCTTCCAGCCACCGGAGAG 706 Query 225631 GGAG 225634 |||| Sbjct 705 GGAG 702 >seq41 Length=11186 Score = 93.3 bits (102), Expect = 8e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 10623 AGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAG 10682 |||||||| | || ||||| ||| | || |||||| |||| | ||| ||||||| Sbjct 5100 AGGTTCTCGTTGACGATGCCGTCGGACGCGGCGAAGAAGGCGAGCACGTGGGAGATGAAG 5159 Query 10683 TGGCGCTCATCATCGTTCAGTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACC 10742 |||||||| | ||||| || || | ||||||| || |||| | || | | | Sbjct 5160 TGGCGCTCGTTGTCGTTGAGCTTGTTCTGCCAGTCGTGCATGTCCTTGGACAGGTCCATC 5219 Query 10743 TCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786 |||||| |||||||||| | || ||||||||||||||||||| Sbjct 5220 TCCTCCGCGGTCCAGAACGACGCCTCGGCCTTCTTGTACATCTG 5263 Score = 89.7 bits (98), Expect = 9e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 9981 TTGGACTTGCCCTCGAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAAC 10040 |||| ||| || | |||||||| | |||||||||||| ||||||||| || | | Sbjct 4065 TTGGTCTTCCCTTGCAGGGAAATCATCTCCATGAAGTCGAAGGGGTTCGTGGAGTTGTAG 4124 Query 10041 TGCTTGGGGTAACCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTC 10100 | ||| || ||||| || || | |||||| || ||||||||||||||||||| | Sbjct 4125 TACTTCTCGTTGCCGAGGGCGACGAGCAGGCGGTCGGCGACGAACTCGATGTACTGGCAC 4184 Query 10101 ATCAGGTCCGAGTTCATGCCAATCATGCG-GCAGGGGATGGCGTCGCAAATGAAGTCCTT 10159 || || | | ||||||||| || | ||| | ||| | ||||| | ||| |||| Sbjct 4185 ATGAGCTTGGCGTTCATGCCGATGA-GCGCGACGGGCAGAGCGTCCGTCAGGAACTCCTG 4243 Query 10160 TTCGTTGGCGACC 10172 ||| || ||||| Sbjct 4244 CTCGATGCCGACC 4256 >seq223 Length=52679 Score = 84.2 bits (92), Expect = 4e-11 Identities = 152/219 (69%), Gaps = 5/219 (2%) Strand=Plus/Minus Query 177067 TGCG-GAGACCGAGAATTTGTTTGATGGCAGTAATCTCGGCGTTGTTAGTAAT--ACTAG 177123 |||| ||| || | |||| ||||| || |||||||||||||| | || ||| | Sbjct 4987 TGCGCGAGGCCCATGATTTTCTTGATCGCCTGGATCTCGGCGTTGTTCATGATCGACTGG 4928 Query 177124 ACACAGACGCATCACGGACATTCAGTAGCTTACCACGGAGGGGGAAAATTCCGTAGCGAT 177183 | ||| || ||||| || || ||||| || ||||| ||||| | ||| || | | Sbjct 4927 TGC--GTCGCGTCGCGGACGTTGAGGAGCTTGCCGCGGAGCGGGAAGACGCCGAAGTGGT 4870 Query 177184 CCCGACCCACGACAGCAAGGCCAGCTGTGGCAAGCGTGGCGGCAGAGTCACCCTCTGTCA 177243 | || || ||||| | ||||| | ||| ||||| ||| ||||| || || |||| Sbjct 4869 CGCGGCCGACGACGCCGAGGCCCGTGACGGCGAGCGTCTTGGCCGAGTCTCCTTCGGTCA 4810 Query 177244 AAATGAGCGTGCACATTCCAGAGTGCTTCGTGCCCGCCC 177282 |||||||||||| | || |||||||||||||| Sbjct 4809 GGATGAGCGTGCACTTGTGCCCGTCCTTCGTGCCCGCCC 4771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921587931322240