Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2512 131 2e-25 >seq2512 Length=16788 Score = 131 bits (144), Expect = 2e-25 Identities = 116/145 (80%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 94182 CGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAA 94241 ||| ||||| ||||||| |||||||||||||| | ||| |||||||||| ||||| Sbjct 7025 CGCAGTCTACATCGAGCCGTGGCACGCGGACGTCTTCGAGTTCCTCGACCTGCGCAAGAA 6966 Query 94242 CCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCT 94301 ||||||||| || || | || | |||||||||||||| |||||| |||| ||||| Sbjct 6965 CCACGGCAAGGAGGAGGTCCGTGCGCGTGACCTCTTCTACGCGCTCTGGATGCCCGACCT 6906 Query 94302 TTTTATGAAACGCGTCGAGAAAAAC 94326 |||||||| ||||||||||| ||| Sbjct 6905 CTTTATGAAGCGCGTCGAGAAGAAC 6881 Score = 82.4 bits (90), Expect = 8e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 95323 CCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATACTC 95382 || ||||||||||||| ||||||||||||||| ||||||||| ||| || | || Sbjct 5511 CCCGAGGACATCAAGGAGCTCTACAAGACCGTCTGGGAGATCAGCCAGAAGGTTGTCATC 5452 Query 95383 GACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAGAG 95420 |||| |||||||| ||| || | |||||| |||||| Sbjct 5451 GACCTCGCGGCCGACCGTGGCGCGTTCATCGACCAGAG 5414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494704697352320