Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq41 201 1e-46 seq2870 123 2e-23 seq305 118 1e-21 seq2900 95.1 1e-14 >seq41 Length=11186 Score = 201 bits (222), Expect = 1e-46 Identities = 180/225 (80%), Gaps = 3/225 (1%) Strand=Plus/Plus Query 133218 GATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTC 133277 ||| || ||||| || ||||| || |||||| | ||||| || || | ||| ||||| Sbjct 5036 GATCTGGAAGCCATAGAAGCAGCGGGCCTCGGCGACCTGGACCTCGCCGGAGAAGCGCTC 5095 Query 133278 GACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGAT 133337 || || || |||||||||||||||||| |||||||| ||||| |||||||| ||| Sbjct 5096 GAGGAGGTTCTCGTTGACGATGCCGTCGGACGCGGCGAAGAAGGCGAGCACGTGGGAGAT 5155 Query 133338 GAAATGGCGCTCGTTGTCGTT---CAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTC 133394 ||| ||||||||||||||||| | | || ||||||| || |||||||||||||||| Sbjct 5156 GAAGTGGCGCTCGTTGTCGTTGAGCTTGTTCTGCCAGTCGTGCATGTCCTTGGACAGGTC 5215 Query 133395 CACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 || |||||| ||||||| |||||||||||||| || |||||||| Sbjct 5216 CATCTCCTCCGCGGTCCAGAACGACGCCTCGGCCTTCTTGTACAT 5260 Score = 86.0 bits (94), Expect = 6e-12 Identities = 141/197 (72%), Gaps = 10/197 (5%) Strand=Plus/Plus Query 132637 TTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAG 132696 || || || || | || |||||| | | ||| || || |||||||| | | ||||||| Sbjct 4065 TTGGTCTTCCCTTGCAGGGAAATCATCTCCATGAAGTCGAAGGGGTTCGTGGAGTTGTAG 4124 Query 132697 TGCTT---GGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGC 132753 | ||| | |||||| || |||||||||| | |||||| |||||||||||||| || Sbjct 4125 TACTTCTCGTTGCCGA---GGGCGACGAGCAGGCGGTCGGCGACGAACTCGATGTACTGG 4181 Query 132754 GACATG-GTTTCGCAATTAAGTCCCAGCAGACGC-ACCGGCAGCGCTTCGGTGAGAAAGC 132811 ||||| | || || || | || | || ||| || ||||| || || || || || Sbjct 4182 CACATGAGCTTGGC-GTTCATGCCGATGAG-CGCGACGGGCAGAGCGTCCGTCAGGAACT 4239 Query 132812 GTTGCTCGATGGCGACC 132828 ||||||||| ||||| Sbjct 4240 CCTGCTCGATGCCGACC 4256 >seq2870 Length=12576 Score = 123 bits (136), Expect = 2e-23 Identities = 156/212 (74%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 38262 ACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCT 38320 || ||||| |||||||||||||| |||| || ||| || | |||| | | |||| | Sbjct 9769 ACCCTCACCGGCAAAACCATCACGCTCGAGGTTGAGTCCTCGGACACGATCGACAACG-T 9711 Query 38321 TAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGC 38380 || | || |||| ||||| ||||| || ||| ||||||| ||||| | || | ||| Sbjct 9710 CAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCTTGATCTTCGC 9651 Query 38381 GGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGAC 38440 ||||| ||||| || |||| || |||||| |||||||||||||| || ||| |||| Sbjct 9650 TGGCAAGCAGCTTGAGGACGGCCGGACCCTCTCGGACTACAACATCCAGAAAGAATCGAC 9591 Query 38441 GCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 ||| || | || || ||| | | ||||||| Sbjct 9590 GCTCCACCTCGTCCTCCGTCTTCGCGGCGGCC 9559 Score = 109 bits (120), Expect = 5e-19 Identities = 154/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 38262 ACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCT 38320 || ||||| ||||| |||||||| |||| |||||| || | |||| | | |||| | Sbjct 10059 ACCCTCACAGGCAAGACCATCACGCTCGAGGTCGAGTCCTCGGACACGATCGACAACG-T 10001 Query 38321 TAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCAACAGCGGCTCATTTACG 38379 || | || || | ||||| ||||| || |||||| ||||| ||||| | || | || Sbjct 10000 CAAGGCCAAGATTCAGGACAAGGAGGGCAT-CCCGCCTGACCAGCAGCGCTTGATCTTCG 9942 Query 38380 CGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGA 38439 | ||||| ||||| || |||| || |||||| ||||||||||| || ||||| ||| Sbjct 9941 CTGGCAAGCAGCTTGAGGACGGCCGGACCCTCTCGGACTACAACATTCAGAAGGAGTCGA 9882 Query 38440 CGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||| ||| | || || ||| || | || || Sbjct 9881 CGCTCCATCTCGTCCTCCGTCTGCGTGGTGG 9851 >seq305 Length=9259 Score = 118 bits (130), Expect = 1e-21 Identities = 147/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 38262 ACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCT 38320 || ||||| ||||| || ||||| |||| |||||| || | |||| | | |||| | Sbjct 8076 ACCCTCACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGACACGATCGACAACG-T 8018 Query 38321 TAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGC 38380 || | || |||| ||||| || || || || ||||||| ||||| ||||| | ||| Sbjct 8017 CAAGGCCAAGATCCAGGACAAGGAAGGTATCCCGCCCGACCAGCAGCGCCTCATCTTCGC 7958 Query 38381 GGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGAC 38440 ||||| ||||| || |||| |||||||| |||||||||||||| ||||| |||| Sbjct 7957 TGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGAC 7898 Query 38441 GCTGCATTTGGTGCTGCGT 38459 ||| || | || |||||| Sbjct 7897 GCTCCACCTCGTCCTGCGT 7879 >seq2900 Length=32347 Score = 95.1 bits (104), Expect = 1e-14 Identities = 110/146 (75%), Gaps = 2/146 (1%) Strand=Plus/Minus Query 38262 ACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGT-GCAAACGCT 38320 || ||||||||||| ||||||||| |||| || ||| | | |||| | | | |||| | Sbjct 25987 ACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCGGACACCATCGACAACG-T 25929 Query 38321 TAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGC 38380 || | ||| |||| ||||| ||||| || ||| ||||||| ||||| ||||| | || Sbjct 25928 CAAGGCAAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGCCTCATCTTTGC 25869 Query 38381 GGGCAAACAGCTGGACGACGAGCGCA 38406 ||||| ||||| || |||| |||| Sbjct 25868 CGGCAAGCAGCTCGAGGACGGCCGCA 25843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500154093537280