Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01-
21] 2,992 sequences; 32,128,072 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq41 201 1e-46
seq2870 123 2e-23
seq305 118 1e-21
seq2900 95.1 1e-14
>seq41
Length=11186
Score = 201 bits (222), Expect = 1e-46
Identities = 180/225 (80%), Gaps = 3/225 (1%)
Strand=Plus/Plus
Query 133218 GATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTC 133277
||| || ||||| || ||||| || |||||| | ||||| || || | ||| |||||
Sbjct 5036 GATCTGGAAGCCATAGAAGCAGCGGGCCTCGGCGACCTGGACCTCGCCGGAGAAGCGCTC 5095
Query 133278 GACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGAT 133337
|| || || |||||||||||||||||| |||||||| ||||| |||||||| |||
Sbjct 5096 GAGGAGGTTCTCGTTGACGATGCCGTCGGACGCGGCGAAGAAGGCGAGCACGTGGGAGAT 5155
Query 133338 GAAATGGCGCTCGTTGTCGTT---CAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTC 133394
||| ||||||||||||||||| | | || ||||||| || ||||||||||||||||
Sbjct 5156 GAAGTGGCGCTCGTTGTCGTTGAGCTTGTTCTGCCAGTCGTGCATGTCCTTGGACAGGTC 5215
Query 133395 CACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
|| |||||| ||||||| |||||||||||||| || ||||||||
Sbjct 5216 CATCTCCTCCGCGGTCCAGAACGACGCCTCGGCCTTCTTGTACAT 5260
Score = 86.0 bits (94), Expect = 6e-12
Identities = 141/197 (72%), Gaps = 10/197 (5%)
Strand=Plus/Plus
Query 132637 TTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAG 132696
|| || || || | || |||||| | | ||| || || |||||||| | | |||||||
Sbjct 4065 TTGGTCTTCCCTTGCAGGGAAATCATCTCCATGAAGTCGAAGGGGTTCGTGGAGTTGTAG 4124
Query 132697 TGCTT---GGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGC 132753
| ||| | |||||| || |||||||||| | |||||| |||||||||||||| ||
Sbjct 4125 TACTTCTCGTTGCCGA---GGGCGACGAGCAGGCGGTCGGCGACGAACTCGATGTACTGG 4181
Query 132754 GACATG-GTTTCGCAATTAAGTCCCAGCAGACGC-ACCGGCAGCGCTTCGGTGAGAAAGC 132811
||||| | || || || | || | || ||| || ||||| || || || || ||
Sbjct 4182 CACATGAGCTTGGC-GTTCATGCCGATGAG-CGCGACGGGCAGAGCGTCCGTCAGGAACT 4239
Query 132812 GTTGCTCGATGGCGACC 132828
||||||||| |||||
Sbjct 4240 CCTGCTCGATGCCGACC 4256
>seq2870
Length=12576
Score = 123 bits (136), Expect = 2e-23
Identities = 156/212 (74%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 38262 ACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCT 38320
|| ||||| |||||||||||||| |||| || ||| || | |||| | | |||| |
Sbjct 9769 ACCCTCACCGGCAAAACCATCACGCTCGAGGTTGAGTCCTCGGACACGATCGACAACG-T 9711
Query 38321 TAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGC 38380
|| | || |||| ||||| ||||| || ||| ||||||| ||||| | || | |||
Sbjct 9710 CAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCTTGATCTTCGC 9651
Query 38381 GGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGAC 38440
||||| ||||| || |||| || |||||| |||||||||||||| || ||| ||||
Sbjct 9650 TGGCAAGCAGCTTGAGGACGGCCGGACCCTCTCGGACTACAACATCCAGAAAGAATCGAC 9591
Query 38441 GCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
||| || | || || ||| | | |||||||
Sbjct 9590 GCTCCACCTCGTCCTCCGTCTTCGCGGCGGCC 9559
Score = 109 bits (120), Expect = 5e-19
Identities = 154/211 (73%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 38262 ACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCT 38320
|| ||||| ||||| |||||||| |||| |||||| || | |||| | | |||| |
Sbjct 10059 ACCCTCACAGGCAAGACCATCACGCTCGAGGTCGAGTCCTCGGACACGATCGACAACG-T 10001
Query 38321 TAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCAACAGCGGCTCATTTACG 38379
|| | || || | ||||| ||||| || |||||| ||||| ||||| | || | ||
Sbjct 10000 CAAGGCCAAGATTCAGGACAAGGAGGGCAT-CCCGCCTGACCAGCAGCGCTTGATCTTCG 9942
Query 38380 CGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGA 38439
| ||||| ||||| || |||| || |||||| ||||||||||| || ||||| |||
Sbjct 9941 CTGGCAAGCAGCTTGAGGACGGCCGGACCCTCTCGGACTACAACATTCAGAAGGAGTCGA 9882
Query 38440 CGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||| ||| | || || ||| || | || ||
Sbjct 9881 CGCTCCATCTCGTCCTCCGTCTGCGTGGTGG 9851
>seq305
Length=9259
Score = 118 bits (130), Expect = 1e-21
Identities = 147/199 (74%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 38262 ACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCT 38320
|| ||||| ||||| || ||||| |||| |||||| || | |||| | | |||| |
Sbjct 8076 ACCCTCACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGACACGATCGACAACG-T 8018
Query 38321 TAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGC 38380
|| | || |||| ||||| || || || || ||||||| ||||| ||||| | |||
Sbjct 8017 CAAGGCCAAGATCCAGGACAAGGAAGGTATCCCGCCCGACCAGCAGCGCCTCATCTTCGC 7958
Query 38381 GGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGAC 38440
||||| ||||| || |||| |||||||| |||||||||||||| ||||| ||||
Sbjct 7957 TGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGAC 7898
Query 38441 GCTGCATTTGGTGCTGCGT 38459
||| || | || ||||||
Sbjct 7897 GCTCCACCTCGTCCTGCGT 7879
>seq2900
Length=32347
Score = 95.1 bits (104), Expect = 1e-14
Identities = 110/146 (75%), Gaps = 2/146 (1%)
Strand=Plus/Minus
Query 38262 ACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGT-GCAAACGCT 38320
|| ||||||||||| ||||||||| |||| || ||| | | |||| | | | |||| |
Sbjct 25987 ACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCGGACACCATCGACAACG-T 25929
Query 38321 TAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGC 38380
|| | ||| |||| ||||| ||||| || ||| ||||||| ||||| ||||| | ||
Sbjct 25928 CAAGGCAAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGCCTCATCTTTGC 25869
Query 38381 GGGCAAACAGCTGGACGACGAGCGCA 38406
||||| ||||| || |||| ||||
Sbjct 25868 CGGCAAGCAGCTCGAGGACGGCCGCA 25843
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500154093537280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |