Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2676 138 1e-27 seq421 107 2e-18 seq545 104 3e-17 >seq2676 Length=14567 Score = 138 bits (152), Expect = 1e-27 Identities = 139/180 (77%), Gaps = 3/180 (2%) Strand=Plus/Plus Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 ||||| || ||||| || || || || ||||| | ||||||||||| | |||||||| Sbjct 7568 CCGATGAGGCGCTTCGCGTCGAAGACGGTGTTCCTCGGGTTCATGGCGGACTGGTTCTTG 7627 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 |||||||| ||||| ||||| ||| | | || ||||||||||| || || || || Sbjct 7628 GCCGCGTCACCGATGAGACGCTCAGCGT---CGGTGAACGCGACGTAGGAAGGCGTGGTC 7684 Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCAC 8116 || || || ||||||||||| || || || || |||||||| |||||||| ||||| ||| Sbjct 7685 CGGTTGCCCTGGTCGTTCGCGATGATCTCGACCCGGTCGTTCTGCCAGACACCGACACAC 7744 >seq421 Length=8526 Score = 107 bits (118), Expect = 2e-18 Identities = 137/188 (73%), Gaps = 3/188 (2%) Strand=Plus/Plus Query 7535 GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG 7594 || ||||| || ||||||||||| ||||| || | ||| || | || || | | | || Sbjct 6058 GAGACATCGAAGGTACCACCACCAAGGTCGAACACGAGGACCTGCGCCTCCTTGCCCTT- 6116 Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654 ||| ||||| ||||||||||| || || || || || || || |||||||| ||| Sbjct 6117 --CTTGTCGAGGCCGTACGCGATCGCGGCGGCGGTGGGCTCGTTGATAATACGGAGAATC 6174 Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 | |||||||| || || | || || || ||||| || || || | ||||| |||||| Sbjct 6175 TCGAGGCCAGCGATCGTGCCGGCGTCCTTGGTCGCCTGGCGCTGAGCGTCGTTGAAGTAG 6234 Query 7715 GCCGGGAC 7722 || ||||| Sbjct 6235 GCGGGGAC 6242 >seq545 Length=28318 Score = 104 bits (114), Expect = 3e-17 Identities = 108/141 (77%), Gaps = 3/141 (2%) Strand=Plus/Minus Query 7975 GTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAA 8034 ||||||||| || |||||||| || ||||| ||||| ||||| || | | | || || Sbjct 3814 GTTCATGGCGGTCTGGTTCTTGGCGGCGTCACCGATCAGACGCTCGGTGT---CGGTGAA 3758 Query 8035 CGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTC 8094 || ||||| || ||||| || || || || |||||||| || || || || || ||||| Sbjct 3757 GGCAACGTAGGACGGGGTGGTCCGGTTGCCCTGGTCGTTGGCGATGATCTCGACACGGTC 3698 Query 8095 GTTTTGCCAGACGCCGACGCA 8115 ||||||||||| || ||||| Sbjct 3697 ATTTTGCCAGACACCAACGCA 3677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635109046033280