Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq2870 87.8 1e-12 >seq2870 Length=12576 Score = 87.8 bits (96), Expect = 1e-12 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||||||||| ||||| |||||||| ||| | || | || || ||||| || || || || Sbjct 9596 TTCTTTCTGGATGTTGTAGTCCGAGAGGGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 9655 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || | || |||||||| | || | ||||||||||| ||||| |||||| Sbjct 9656 GATCAAGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 9715 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965 | |||| || || |||||| |||| || |||||||| || ||||| |||| Sbjct 9716 GTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATGGTTTTGCCGGTGAGGGTCT 9771 Score = 86.0 bits (94), Expect = 4e-12 Identities = 124/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| |||||||| ||| | || | || || ||||| || || || || Sbjct 9887 TCCTTCTGAATGTTGTAGTCCGAGAGGGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAG 9946 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | || |||||||| |||| | ||||||||||| |||||| |||||| Sbjct 9947 ATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTG 10006 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965 | |||| || || ||| || |||| || ||||| || || ||||| |||| Sbjct 10007 TCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATGGTCTTGCCTGTGAGGGTCT 10061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324621762235776