Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01-
21] 2,992 sequences; 32,128,072 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq2364 116 3e-21
seq2869 86.0 5e-12
>seq2364
Length=19119
Score = 116 bits (128), Expect = 3e-21
Identities = 233/340 (69%), Gaps = 4/340 (1%)
Strand=Plus/Minus
Query 30046 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 30105
|||||||| |||| || ||||| | || || ||||| | ||| || | |||
Sbjct 17430 GGGTTCCAAGCGCTCAAAATGATCCTCCGATCCGTCGGGTTCTCCCTAATCTTCTTGACG 17371
Query 30106 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTG-TACTC 30164
| | |||||||| ||||| ||| |||| || || || || || | ||| |
Sbjct 17370 ACCTCGTGCAGCTGGTCCACTCCCTTCCCACTATAATCCGCT-TCGCACCCCTCATACGC 17312
Query 30165 TGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTG 30224
|| || || ||||||||||||||||| ||||| || || || || ||||| ||||||
Sbjct 17311 CGCCCCAAAGTGCCTCCACTGGAACCCATACACGGGCCCGAGATCCCCCTCCCGCCTGTG 17252
Query 30225 CTCGAAGCCCCT-CTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCC 30283
| | | |||||| ||| |||| || || | || || || |||||||||| | | |
Sbjct 17251 CCCCA-GCCCCTGCTTCTCCAGGAACTCCTTCGAGCCATTCCCGTCCCAGATGTGAATTC 17193
Query 30284 CCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCA 30343
|||| | |||||||| | || || ||||| | |||||||| || |||||||| |
Sbjct 17192 CCTTTGCAGAGAGCTCGAGAGCGTCCGTCGACCCCCGCACGAACCATAGGAGCTCCTCGA 17133
Query 30344 CGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383
||| | | ||||| | |||||||||||| || ||
Sbjct 17132 GCACGCCGCGCAGGAAGACGCGCTTGGTCGTGAGCAGCGG 17093
>seq2869
Length=12581
Score = 86.0 bits (94), Expect = 5e-12
Identities = 109/145 (75%), Gaps = 4/145 (3%)
Strand=Plus/Plus
Query 52051 AGATGGGCGACAAGTTTGCGTCGT-TCACGGCGCAAAAGGGGACGTGCGGAGCCGTCCTG 52109
||| |||||| ||||| |||||| |||||| ||| |||||||| ||| | |||
Sbjct 4971 AGACGGGCGATAAGTTCGCGTCGCGTCACGG-GCAGAAGGGGACAATCGGCATCA-CCTA 5028
Query 52110 ACCCAG-GAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCC 52168
| || || |||||||||||| | ||||| || |||||||||||||||||||||
Sbjct 5029 CCGCACCGAAGACATGCCCTTCACCGCCGACGGCGTCACGCCCGACCTCATCATCAACCC 5088
Query 52169 CCACGCCTTTCCATCCAGGATGACC 52193
||||||| | || || | ||||||
Sbjct 5089 CCACGCCATCCCCTCGCGCATGACC 5113
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408602699759216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |