Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01-
21] 2,992 sequences; 32,128,072 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq41 111 3e-19
seq2331 87.8 3e-12
seq2512 84.2 4e-11
>seq41
Length=11186
Score = 111 bits (122), Expect = 3e-19
Identities = 160/225 (71%), Gaps = 3/225 (1%)
Strand=Plus/Plus
Query 48454 GATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTC 48513
||||||||| || |||||| | |||||| ||||| || || |||||| | |||
Sbjct 5036 GATCTGGAAGCCATAGAAGCAGCGGGCCTCGGCGACCTGGACCTCGCCGGAGAAGCGCTC 5095
Query 48514 CAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAG 48573
|| || ||||| ||||| || || || || || || |||||||| || || || |
Sbjct 5096 GAGGAGGTTCTCGTTGACGATGCCGTCGGACGCGGCGAAGAAGGCGAGCACGTGGGAGAT 5155
Query 48574 GAAATGGCGCTCGTTGTGGGTGAGAGCATT---CCAGCCCTGTACGTCTTTGCCCAGGTC 48630
||| ||||||||||||| | |||| || |||| | || | ||| ||| ||||||
Sbjct 5156 GAAGTGGCGCTCGTTGTCGTTGAGCTTGTTCTGCCAGTCGTGCATGTCCTTGGACAGGTC 5215
Query 48631 CACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACAT 48675
|| || ||| | |||||||| ||||| || || ||||||||
Sbjct 5216 CATCTCCTCCGCGGTCCAGAACGACGCCTCGGCCTTCTTGTACAT 5260
>seq2331
Length=19725
Score = 87.8 bits (96), Expect = 3e-12
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 38964 AGCTCCCACCTGTTGGCGGAGAAGAGCAGGTGGACTGCGTGGTCGTCCAGCTCCGTCTTA 39023
|| ||||||| |||||| ||||||||||| || || || ||||||||| ||||| ||||
Sbjct 12024 AGTTCCCACCGGTTGGCAGAGAAGAGCAGATGCACGGCCCGGTCGTCCATCTCCGCCTTA 11965
Query 39024 CTCTCCAGGTACGAGCTGATCATCTTTCCGATGGTAGTGGT 39064
||| ||| |||| | ||||||||| || || | ||| ||
Sbjct 11964 TTCTGCAGATACGCGTCGATCATCTTCCCAATTGGAGTCGT 11924
>seq2512
Length=16788
Score = 84.2 bits (92), Expect = 4e-11
Identities = 110/150 (73%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 213794 CCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGA 213852
||||||| ||| | |||| ||| | || ||| || ||||| || | ||| |||||| ||
Sbjct 6872 CCAGTCCTCGTTCTTCTC-GACGCGCTTCATAAAGAGGTCGGGCATCCAGAGCGCGTAGA 6930
Query 213853 ACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAA 213912
| ||||| | | | ||| ||| || ||| |||||||| || || || || |
Sbjct 6931 AGAGGTCACGCGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGGAACTCGA 6990
Query 213913 AGATGTCCGCGTGCCACGGCTCCATGTAGA 213942
||| |||||||||||||||||| |||||||
Sbjct 6991 AGACGTCCGCGTGCCACGGCTCGATGTAGA 7020
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931497960673280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |