Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01-
21] 2,992 sequences; 32,128,072 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq2512 107 4e-18
seq41 98.7 2e-15
>seq2512
Length=16788
Score = 107 bits (118), Expect = 4e-18
Identities = 122/164 (74%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 221420 AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAA 221479
|| || ||||||||||||||||| |||||| ||||||||| |||||| ||||| ||
Sbjct 6096 AGCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTGCTTGGCTTCGGGCGAC 6155
Query 221480 GTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATG 221539
| |||||| |||| ||||| || ||||||||| ||||| || |||| |||||
Sbjct 6156 GAGAAGGGGTAGCGCATGATCTGGAACGTGTCGGCCAGGCCCTGCACGCCGAGGCCGATC 6215
Query 221540 GGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATA 221583
|| | ||| | | ||||||| | ||| || || ||||| ||
Sbjct 6216 GGGCGGTGACGCATGTTGGAGTTGCGCGCCTCAGGGACGGGGTA 6259
Score = 100 bits (110), Expect = 5e-16
Identities = 153/217 (71%), Gaps = 1/217 (0%)
Strand=Plus/Plus
Query 221954 TCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTC 222013
||||||| | ||||| |||||| |||||| ||| | ||| || || | || |
Sbjct 6813 TCAAACTCCTTGCCGTAGACCTCGTGCAGGCCAGGAGCCTCGGCAGGGCAGAAGAGCGGC 6872
Query 222014 CAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAG 222073
|||| || ||| | | ||| | || ||| |||||||| || ||||| ||||| | |||
Sbjct 6873 CAGTCCTCGTTCTTCTCGACGCGCTTCATAAAGAGGTCGGGCATCCAGAGCGCGTAGAAG 6932
Query 222074 AGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAA 222133
|| || | | || ||||||| ||||| ||| || | ||| || | ||||| ||
Sbjct 6933 AGGTCACGCGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGGAACTCGAAG 6992
Query 222134 ATGTCAGCGTGCCACGGCTCCAGATAGACGGC-CAGA 222169
| ||| |||||||||||||| | ||||| || ||||
Sbjct 6993 ACGTCCGCGTGCCACGGCTCGATGTAGACTGCGCAGA 7029
>seq41
Length=11186
Score = 98.7 bits (108), Expect = 2e-15
Identities = 164/234 (70%), Gaps = 5/234 (2%)
Strand=Plus/Minus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| |||||||||||||||| | || ||||||||| || ||||| || |||
Sbjct 5269 ATCTGGCAGATGTACAAGAAGGCCGAGGCGTCGTTCTGGACCGCGGAGGAGATGGACCTG 5210
Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATC-CAAAG---ACGAGCAGCATTTTCTCAA 25592
||||||||||| ||| |||| | | | | | ||| | |||||| || || ||
Sbjct 5209 TCCAAGGACATGCACGACTGGCA-GAACAAGCTCAACGACAACGAGCGCCACTTCATCTC 5151
Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652
||||| | || ||||| || || || || || || || |||||||| || |||| |
Sbjct 5150 CCACGTGCTCGCCTTCTTCGCCGCGTCCGACGGCATCGTCAACGAGAACCTCCTCGAGCG 5091
Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706
||| || | || || ||| || |||||| || ||||| || ||||||||
Sbjct 5090 CTTCTCCGGCGAGGTCCAGGTCGCCGAGGCCCGCTGCTTCTATGGCTTCCAGAT 5037
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928810061204480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |