Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq2512 107 4e-18 seq41 98.7 2e-15 >seq2512 Length=16788 Score = 107 bits (118), Expect = 4e-18 Identities = 122/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 221420 AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAA 221479 || || ||||||||||||||||| |||||| ||||||||| |||||| ||||| || Sbjct 6096 AGCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTGCTTGGCTTCGGGCGAC 6155 Query 221480 GTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATG 221539 | |||||| |||| ||||| || ||||||||| ||||| || |||| ||||| Sbjct 6156 GAGAAGGGGTAGCGCATGATCTGGAACGTGTCGGCCAGGCCCTGCACGCCGAGGCCGATC 6215 Query 221540 GGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATA 221583 || | ||| | | ||||||| | ||| || || ||||| || Sbjct 6216 GGGCGGTGACGCATGTTGGAGTTGCGCGCCTCAGGGACGGGGTA 6259 Score = 100 bits (110), Expect = 5e-16 Identities = 153/217 (71%), Gaps = 1/217 (0%) Strand=Plus/Plus Query 221954 TCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTC 222013 ||||||| | ||||| |||||| |||||| ||| | ||| || || | || | Sbjct 6813 TCAAACTCCTTGCCGTAGACCTCGTGCAGGCCAGGAGCCTCGGCAGGGCAGAAGAGCGGC 6872 Query 222014 CAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAG 222073 |||| || ||| | | ||| | || ||| |||||||| || ||||| ||||| | ||| Sbjct 6873 CAGTCCTCGTTCTTCTCGACGCGCTTCATAAAGAGGTCGGGCATCCAGAGCGCGTAGAAG 6932 Query 222074 AGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAA 222133 || || | | || ||||||| ||||| ||| || | ||| || | ||||| || Sbjct 6933 AGGTCACGCGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGGAACTCGAAG 6992 Query 222134 ATGTCAGCGTGCCACGGCTCCAGATAGACGGC-CAGA 222169 | ||| |||||||||||||| | ||||| || |||| Sbjct 6993 ACGTCCGCGTGCCACGGCTCGATGTAGACTGCGCAGA 7029 >seq41 Length=11186 Score = 98.7 bits (108), Expect = 2e-15 Identities = 164/234 (70%), Gaps = 5/234 (2%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| | || ||||||||| || ||||| || ||| Sbjct 5269 ATCTGGCAGATGTACAAGAAGGCCGAGGCGTCGTTCTGGACCGCGGAGGAGATGGACCTG 5210 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATC-CAAAG---ACGAGCAGCATTTTCTCAA 25592 ||||||||||| ||| |||| | | | | | ||| | |||||| || || || Sbjct 5209 TCCAAGGACATGCACGACTGGCA-GAACAAGCTCAACGACAACGAGCGCCACTTCATCTC 5151 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 ||||| | || ||||| || || || || || || || |||||||| || |||| | Sbjct 5150 CCACGTGCTCGCCTTCTTCGCCGCGTCCGACGGCATCGTCAACGAGAACCTCCTCGAGCG 5091 Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 ||| || | || || ||| || |||||| || ||||| || |||||||| Sbjct 5090 CTTCTCCGGCGAGGTCCAGGTCGCCGAGGCCCGCTGCTTCTATGGCTTCCAGAT 5037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928810061204480