Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01-
21] 2,992 sequences; 32,128,072 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq2870 163 4e-35
seq2247 122 1e-22
seq2676 118 1e-21
seq2900 114 2e-20
seq545 109 7e-19
>seq2870
Length=12576
Score = 163 bits (180), Expect = 4e-35
Identities = 162/210 (77%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 171880 ACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATC 171939
||||| || || || || ||||| |||||||| ||||| || ||||| ||||| ||| ||
Sbjct 10059 ACCCTCACAGGCAAGACCATCACGCTCGAGGTCGAGTCCTCGGACACGATCGACAACGTC 10000
Query 171940 AAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCT 171999
|| ||||||||||| || ||||| ||||| || || || ||||| || | || || |||
Sbjct 9999 AAGGCCAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAGCAGCGCTTGATCTTCGCT 9940
Query 172000 GGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACT 172059
|| || |||||||| || || || |||||| | || |||||| |||| |||||||| ||
Sbjct 9939 GGCAAGCAGCTTGAGGACGGCCGGACCCTCTCGGACTACAACATTCAGAAGGAGTCGACG 9880
Query 172060 CTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
|| || || || || | || || ||||||
Sbjct 9879 CTCCATCTCGTCCTCCGTCTGCGTGGTGGT 9850
Score = 161 bits (178), Expect = 1e-34
Identities = 161/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 171880 ACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATC 171939
||||| || || ||||| ||||| |||||||||||||| || ||||| ||||| ||| ||
Sbjct 9769 ACCCTCACCGGCAAAACCATCACGCTCGAGGTTGAGTCCTCGGACACGATCGACAACGTC 9710
Query 171940 AAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCT 171999
|| |||||||| || || ||||| ||||| || ||||| ||||| || | || || |||
Sbjct 9709 AAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCTTGATCTTCGCT 9650
Query 172000 GGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACT 172059
|| || |||||||| || || || |||||| | || |||||| | || || || || ||
Sbjct 9649 GGCAAGCAGCTTGAGGACGGCCGGACCCTCTCGGACTACAACATCCAGAAAGAATCGACG 9590
Query 172060 CTACACCTTGTTCTAAGGCTTCGGGGTGG 172088
|| ||||| || || | ||||| || ||
Sbjct 9589 CTCCACCTCGTCCTCCGTCTTCGCGGCGG 9561
>seq2247
Length=21484
Score = 122 bits (134), Expect = 1e-22
Identities = 118/152 (78%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 171871 TTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATC 171930
|| || || ||||| || || || || |||||||||||||| ||||| || ||||| |||
Sbjct 11454 TTCGTCAAGACCCTGACGGGTAAGACGATCACCCTCGAGGTGGAGTCTTCCGACACCATC 11513
Query 171931 GATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTT 171990
|| ||| |||| |||||||| || || ||||| ||||| || || || ||||| || ||
Sbjct 11514 GACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGCCTG 11573
Query 171991 ATTTTTGCTGGTAAACAGCTTGAAGATGGACG 172022
|| || ||||| || ||||| || || || ||
Sbjct 11574 ATCTTCGCTGGCAAGCAGCTCGAGGACGGCCG 11605
>seq2676
Length=14567
Score = 118 bits (130), Expect = 1e-21
Identities = 134/180 (74%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 195332 TGTGTTGGTGTATGGCAAAATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGT 195391
||||| ||||| ||||| || || || || ||||| ||| |||| ||||| || |||||
Sbjct 7743 TGTGTCGGTGTCTGGCAGAACGACCGGGTCGAGATCATCGCGAACGACCAGGGCAACCGG 7684
Query 195392 ACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAA 195451
|| || || || ||||| || || || || ||| |||||| | || || || || ||
Sbjct 7683 ACCACGCCTTCCTACGTCGCGTTCACCGACGCTGAGCGTCTCATCGGTGACGCGGCCAAG 7624
Query 195452 AATCAGACAGCTATGAACCCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGC 195511
|| ||| | || |||||||| | || || ||||| ||||||||||| || || || |||
Sbjct 7623 AACCAGTCCGCCATGAACCCGAGGAACACCGTCTTCGACGCGAAGCGCCTCATCGGCCGC 7564
>seq2900
Length=32347
Score = 114 bits (126), Expect = 2e-20
Identities = 111/143 (78%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 171880 ACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATC 171939
||||| || || || || |||||||||||||| ||||| || ||||| ||||| ||| ||
Sbjct 25987 ACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCGGACACCATCGACAACGTC 25928
Query 171940 AAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCT 171999
|| || ||||| || || ||||| || || || ||||| ||||| || || || |||||
Sbjct 25927 AAGGCAAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGCCTCATCTTTGCC 25868
Query 172000 GGTAAACAGCTTGAAGATGGACG 172022
|| || ||||| || || || ||
Sbjct 25867 GGCAAGCAGCTCGAGGACGGCCG 25845
>seq545
Length=28318
Score = 109 bits (120), Expect = 7e-19
Identities = 107/138 (78%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 195332 TGTGTTGGTGTATGGCAAAATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGT 195391
|| |||||||| ||||||||||| ||||| ||||| ||| | || ||||| || |||||
Sbjct 3677 TGCGTTGGTGTCTGGCAAAATGACCGTGTCGAGATCATCGCCAACGACCAGGGCAACCGG 3736
Query 195392 ACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAA 195451
|| || || || ||||||||||| || || | || ||||| | || || ||||| ||
Sbjct 3737 ACCACCCCGTCCTACGTTGCCTTCACCGACACCGAGCGTCTGATCGGTGACGCCGCCAAG 3796
Query 195452 AATCAGACAGCTATGAAC 195469
|| ||||| || ||||||
Sbjct 3797 AACCAGACCGCCATGAAC 3814
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657837795946240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |