Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2785 91.5 4e-13 >seq2785 Length=13414 Score = 91.5 bits (100), Expect = 4e-13 Identities = 192/282 (68%), Gaps = 6/282 (2%) Strand=Plus/Minus Query 302565 CATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTT 302624 ||| |||||||| | ||| | | ||||||||| |||||||| || | || || Sbjct 11145 CATGATGTCTTCGAGCGCCTTAACGAGACGACGCTGGATATAACCCGTCTCGGCAGTCTT 11086 Query 302625 TACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGG 302684 || || || || || ||||| | ||||| |||| || |||||||| | ||| || Sbjct 11085 GACGGCCGTGTCGATCAGACCCTCGCGACCGGCCATGGCGTGGAAGAAGAACTCGGAGGG 11026 Query 302685 TCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGC--GAATCGTC 302741 ||| | || | | | ||| |||| ||||| || |||| |||||| ||| ||| Sbjct 11025 -CGTCAAGCCGCGGAGGTACGAGTTCTCGACGAAGCCGCGCGACTCGGGACTGAA--GTC 10969 Query 302742 GAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATC 302801 | |||||||||||| || || || | || || | ||||| ||||| ||||| || || Sbjct 10968 GTCCTTGGTAAAGTGCGGGAGCGTGCGGTACTTGAACCCGTACGGGATTCGCTTGCCCTC 10909 Query 302802 AACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 || |||||| || | |||| |||||| || || || Sbjct 10908 GACCGACTGCTGGCCGACACACGCCGACATCTGTGAGATGTT 10867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471761177872304