Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01-
21] 2,992 sequences; 32,128,072 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq2785 91.5 4e-13
>seq2785
Length=13414
Score = 91.5 bits (100), Expect = 4e-13
Identities = 192/282 (68%), Gaps = 6/282 (2%)
Strand=Plus/Minus
Query 302565 CATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTT 302624
||| |||||||| | ||| | | ||||||||| |||||||| || | || ||
Sbjct 11145 CATGATGTCTTCGAGCGCCTTAACGAGACGACGCTGGATATAACCCGTCTCGGCAGTCTT 11086
Query 302625 TACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGG 302684
|| || || || || ||||| | ||||| |||| || |||||||| | ||| ||
Sbjct 11085 GACGGCCGTGTCGATCAGACCCTCGCGACCGGCCATGGCGTGGAAGAAGAACTCGGAGGG 11026
Query 302685 TCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGC--GAATCGTC 302741
||| | || | | | ||| |||| ||||| || |||| |||||| ||| |||
Sbjct 11025 -CGTCAAGCCGCGGAGGTACGAGTTCTCGACGAAGCCGCGCGACTCGGGACTGAA--GTC 10969
Query 302742 GAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATC 302801
| |||||||||||| || || || | || || | ||||| ||||| ||||| || ||
Sbjct 10968 GTCCTTGGTAAAGTGCGGGAGCGTGCGGTACTTGAACCCGTACGGGATTCGCTTGCCCTC 10909
Query 302802 AACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843
|| |||||| || | |||| |||||| || || ||
Sbjct 10908 GACCGACTGCTGGCCGACACACGCCGACATCTGTGAGATGTT 10867
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471761177872304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |