Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01-
21] 2,992 sequences; 32,128,072 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq2870 111 1e-19
>seq2870
Length=12576
Score = 111 bits (122), Expect = 1e-19
Identities = 130/176 (74%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||||||||| |||||||| ||| | || | || || || ||||| || |||||
Sbjct 9886 CTCCTTCTGAATGTTGTAGTCCGAGAGGGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 9945
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||||| || |||||||| |||| | ||||||||||| | || || ||||||
Sbjct 9946 GATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTT 10005
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCT 34961
| |||| || || |||||| || | || |||||||| || ||||||||||
Sbjct 10006 GTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATGGTCTTGCCTGTGAGGGTCT 10061
Score = 87.8 bits (96), Expect = 1e-12
Identities = 137/196 (70%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | || || ||||| ||||| |||||||| ||| | || | ||
Sbjct 9576 AGGACGAGGTGGAGCGTCGATTCTTTCTGGATGTTGTAGTCCGAGAGGGTCCGGCCGTCC 9635
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || |||||||||| || |||||||| | || | |||||||||||
Sbjct 9636 TCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 9695
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | |||| || || ||| || || | || |||||
Sbjct 9696 TGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATGGTT 9755
Query 34946 TTTCCCGTGAGGGTCT 34961
|| || ||||||||||
Sbjct 9756 TTGCCGGTGAGGGTCT 9771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325680923612048
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |