Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01-
21] 2,992 sequences; 32,128,072 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq305 86.0 1e-11
>seq305
Length=9259
Score = 86.0 bits (94), Expect = 1e-11
Identities = 139/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
|||||| || | ||| || || || || ||||| || || || || || || | | ||
Sbjct 7879 ACGCAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCC 7938
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
||| || || || || ||||| ||||| || | || || || || || || ||||||||
Sbjct 7939 GTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCTTCCTT 7998
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
|| || ||||| || || || || || ||||| || | || || || | || ||
Sbjct 7999 GTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGAT 8058
Query 82775 CGTCTTGCCTGTCAACGTCT 82794
||||||||| || | ||||
Sbjct 8059 CGTCTTGCCGGTGAGGGTCT 8078
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981789561654288
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |