Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2512 122 8e-23 seq305 116 4e-21 seq2247 113 4e-20 seq2900 109 5e-19 seq2870 109 5e-19 seq278 105 6e-18 seq41 96.9 3e-15 >seq2512 Length=16788 Score = 122 bits (134), Expect = 8e-23 Identities = 240/347 (69%), Gaps = 6/347 (2%) Strand=Plus/Plus Query 148359 GCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGC 148418 || || ||||| ||| || |||||||||||||| | |||| | | || ||| | Sbjct 5901 GCAGTCGGCATCGGCGCGACGAGCAGCGAGTTGCGGAGACCGTGCTGGGCGATCTTGTCC 5960 Query 148419 TTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGA 148478 || || | ||||||||||| || ||||| || ||| ||||||||||||||| ||| Sbjct 5961 TTGAGCGAGGCCCAGTCCCAAAGGTCGGACGGGGTTACGCCCCACATGTCGTACTGGAGA 6020 Query 148479 ATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCG-CCGCCAG 148537 | ||| ||| ||||| ||||||||| || ||||| || | || || || || Sbjct 6021 ACGCCCTTGCTCGCGGGCGAGCCCTCGTAGGACGAGTACGTGCCCT-CGACGATAGCGAG 6079 Query 148538 TTCG-CAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCA 148596 ||| ||| ||||||||||||| ||| ||| || |||||| || ||| |||||||| Sbjct 6080 CTCGACAG-ACGCCTCGAGCGCGGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCT 6138 Query 148597 GCGCCGCCGACTCGCTTTCGTACGGCATA-CGCAGCCGCACAAACGCGTCGGCAAGGCCC 148655 || | | | || | || || |||| | |||| |||||| |||||| Sbjct 6139 GC-TTGGCTTCGGGCGACGAGAAGGGGTAGCGCATGATCTGGAACGTGTCGGCCAGGCCC 6197 Query 148656 TGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGC 148702 || ||||| | ||| || || ||||| ||||||||| |||||| Sbjct 6198 TGCACGCCGAGGCCGATCGGGCGGTGACGCATGTTGGAGTTGCGCGC 6244 Score = 102 bits (112), Expect = 8e-17 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 149066 CTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGA 149125 ||| ||| ||| ||||||| |||| || || || || | ||||| | ||||| Sbjct 6812 CTCAAACTCCTTGCCGTAGACCTCGTGCAGGCCAGGAGCCTCGGCAGGGCAGAAGAGCGG 6871 Query 149126 CCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACAT 149185 ||| | ||| | | |||||||||||||| || ||||||| |||||||||||| | Sbjct 6872 CCAGTCCTCGTTCTTCTCGACGCGCTTCATAAAGAGGTCGGGCATCCAGAGCGCGTAGAA 6931 Query 149186 GAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAA 149245 |||||| ||||| | || || ||| ||| |||||||| ||| | ||| Sbjct 6932 GAGGTCACGCGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGGAACTCGAA 6991 Query 149246 TATGTCCGCGTGCCACGGCTCAATGTACACCGCG 149279 | |||||||||||||||||| ||||| || ||| Sbjct 6992 GACGTCCGCGTGCCACGGCTCGATGTAGACTGCG 7025 >seq305 Length=9259 Score = 116 bits (128), Expect = 4e-21 Identities = 133/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||| || | ||| |||||||||||||||||| Sbjct 7898 GTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCA 7957 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | ||||| |||||||||||||| ||||| ||||||||||| |||||| |||| Sbjct 7958 GCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCTTCCTTGTCCTGGATCTTGGCCTTG 8017 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | |||||| | || ||| || |||| |||| || |||||||| || || Sbjct 8018 ACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTGAGGGT 8076 >seq2247 Length=21484 Score = 113 bits (124), Expect = 4e-20 Identities = 113/147 (77%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 |||||||||||||||||| ||| | || || ||||||||||| || |||||||| ||||| Sbjct 11600 GTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTT 11541 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| |||||| ||||| | || | ||||||| | |||||| |||| ||||| Sbjct 11540 GTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGAT 11481 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAA 133651 || || || ||||| || || ||||| Sbjct 11480 CGTCTTACCCGTCAGGGTCTTGACGAA 11454 >seq2900 Length=32347 Score = 109 bits (120), Expect = 5e-19 Identities = 107/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 |||||||||||||||||| || | ||||| |||||||||||||| ||||| || ||||| Sbjct 25850 GTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGGATACCCTCCTT 25909 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| ||||||| ||||| | || | ||||| | | |||||| |||| ||||| Sbjct 25910 GTCCTGGATCTTTGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGGGTGAT 25969 Query 133625 GGTTTTGCCGGTCAGAGT 133642 ||| ||||| || || || Sbjct 25970 GGTCTTGCCCGTGAGGGT 25987 >seq2870 Length=12576 Score = 109 bits (120), Expect = 5e-19 Identities = 107/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 |||||| ||||||||||| ||| | || | |||||||||||||| |||||||| ||||| Sbjct 9632 GTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGGGGGATGCCCTCCTT 9691 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| |||||| ||||| | || | |||||| | || ||| || |||| |||| Sbjct 9692 GTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGAT 9751 Query 133625 GGTTTTGCCGGTCAGAGT 133642 |||||||||||| || || Sbjct 9752 GGTTTTGCCGGTGAGGGT 9769 Score = 91.5 bits (100), Expect = 1e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 |||||| ||||||||||| ||| | || | ||||||||||| || |||||||| ||||| Sbjct 9922 GTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTT 9981 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| ||||| ||||| | || | |||||| | || ||| || |||| |||| Sbjct 9982 GTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGAT 10041 Query 133625 GGTTTTGCCGGTCAGAGT 133642 ||| ||||| || || || Sbjct 10042 GGTCTTGCCTGTGAGGGT 10059 >seq278 Length=9506 Score = 105 bits (116), Expect = 6e-18 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 |||||| ||||||||||| ||| | || | |||||||||||||| |||||||| ||||| Sbjct 9496 GTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGGGGGATGCCCTCCTT 9437 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| |||||| ||||| | || | |||||| | || ||| || |||| |||| Sbjct 9436 GTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGAT 9377 Query 133625 GGTTTTGCCGGTCAGAGT 133642 ||| |||||||| || || Sbjct 9376 GGTCTTGCCGGTGAGGGT 9359 >seq41 Length=11186 Score = 96.9 bits (106), Expect = 3e-15 Identities = 108/142 (76%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 121023 CTCGATAAGGTTAATATTCACGATACTGTCGGCGGCGGCGAAGAACGCCAGCACGTGCTT 121082 ||||| ||||| || ||||| | ||||| ||||||||||| || |||||||| Sbjct 5093 CTCGAGGAGGTTCTCGTTGACGATGCCGTCGGACGCGGCGAAGAAGGCGAGCACGTGGGA 5152 Query 121083 GATAAAGTGTCGCTCGTCGTCCGTGAGCTTGTGCGCAAAATCGT-CATAGTCCTTGGACA 121141 ||| ||||| ||||||| ||| ||||||||| | | |||| ||| ||||||||||| Sbjct 5153 GATGAAGTGGCGCTCGTTGTCGTTGAGCTTGTTCTGCCAGTCGTGCAT-GTCCTTGGACA 5211 Query 121142 GGTCGACCTCCTCCACCTTCCA 121163 |||| | ||||||| | |||| Sbjct 5212 GGTCCATCTCCTCCGCGGTCCA 5233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483402720062080