Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq2869 131 2e-24 seq41 127 3e-23 seq282 116 5e-20 seq2512 111 2e-18 seq1961 105 1e-16 seq1 93.3 6e-13 seq108 91.5 2e-12 seq905 86.0 9e-11 >seq2869 Length=12581 Score = 131 bits (144), Expect = 2e-24 Identities = 349/522 (67%), Gaps = 15/522 (3%) Strand=Plus/Minus Query 1600258 CTCCATCTCTCCAAGGCGGAAGCCGCCCGAGCGCGAGCGGCCCTCGACCGGCTGCTTGGT 1600317 ||||||||| || | || || || || ||||| || || ||||||||||| || Sbjct 5449 CTCCATCTCGCCGAAACGCAAACCACCGTCACGCGAACGACCTTCGACCGGCTGGCGCGT 5390 Query 1600318 GAGCATCTGGACGGGGCCGCGTGGTCGGGCGTGAATCTTGTCGATGGCCACGTGGCGCAG 1600377 || |||||||| || ||||| | || ||||| ||||||||| | ||| ||| ||| Sbjct 5389 CAGGATCTGGACTGGACCGCGCGCGCGCGCGTGGATCTTGTCGTCGACCATGTGCTTCAG 5330 Query 1600378 GGCCTGGTAGTAGACCGGCGCCGTAAAGATCAACGCCTCCATGGGCTCGC---CGGTGTG 1600434 | ||||||||| ||| |||| | | || | | || | ||| || ||||||| Sbjct 5329 GCGCTGGTAGTACGTCGG-GCCG--AGGTACACCTGCGCCTGGAGCTTGCGGCCGGTGTG 5273 Query 1600435 CGGGTGGTAGAGCACCTCCTTGCCGTAGCGCTCGCATCCGTGG-CGAGCCAACTCGGCGG 1600493 || ||| | || || |||| || || | | || | || | | ||| | Sbjct 5272 GCCGTTGTACATGACTTCAAGGCCGCGGCTCTGGTAGCCCTTCTCGCGGAGGAT-GGCCG 5214 Query 1600494 CGACATCGTCGACGGTGACGCCGCCAAAGGGCGTGCCGTCGCCCACATAGCC-CTC-GCG 1600551 ||| |||||||||| | || || ||||| |||||||| | |||| || ||| Sbjct 5213 AGACGCTCTCGACGGTGAGGTCGGTGAACGGCGTCGCGTCGCCCTCGGAGCCGCTGAGCG 5154 Query 1600552 GCAGGCCACCTTGCCCAGGAGGGCCTCCATCATCTTGCCCATGGTCATGCGCGACGGGAT 1600611 | || || || || || ||| | || | ||| |||||||||||||| ||||| Sbjct 5153 TC--GCGACTTTCGAGAGCAGACACTCGACCAAGTGGCCGATGGTCATGCGCGAGGGGAT 5096 Query 1600612 GGCGTGCGGGTTGATCACAATGTCGGGCGTGGCACCGCCGCGAGGCGACCAGGGCATGTC 1600671 |||||| |||||||| | | |||||||||| | ||| || | || || |||||||||| Sbjct 5095 GGCGTGGGGGTTGATGATGAGGTCGGGCGTGACGCCGTCG-GCGGTGA--AGGGCATGTC 5039 Query 1600672 CTCGGTGGAGCGCACGCTGCCCACGGTGCCCTTTTGGCCGTGGCGCGACGACAGTTTGTC 1600731 |||||| | | |||| | || ||||| || ||||| ||||||| | || || Sbjct 5038 TTCGGTGCGGTAGGTGATGCCGATTGTCCCCTTCTGCCCGTGACGCGACGCGAACTTATC 4979 Query 1600732 GCCCACCTCGGGCTGGCGCATGGCCCGCGTGACGATCTTGAC 1600773 |||| || ||| |||| | | ||| | || |||||| Sbjct 4978 GCCCGTCTGCGGCACGCGCGTCGAGCGCACGCGGACCTTGAC 4937 >seq41 Length=11186 Score = 127 bits (140), Expect = 3e-23 Identities = 147/194 (76%), Gaps = 3/194 (2%) Strand=Plus/Minus Query 1456538 GTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCGCTCATCGGCATGAAC 1456597 |||| |||||| | ||||| | | || | ||||| || |||||||||||||||||| Sbjct 4255 GTCGGCATCGAGCAGGAGTTCCTGACGGACGCTCTGCCCGTCGCGCTCATCGGCATGAAC 4196 Query 1456598 GCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGCTCGCGGCGCTCG 1456657 |||| |||||||||||||||||| | | || ||||||||||||||||||| || |||| Sbjct 4195 GCCA-AGCTCATGTGCCAGTACATCG-AGTTCGTCGCCGACCGCCTGCTCGTCGCCCTCG 4138 Query 1456658 GCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGGAGTTGATCTCGCTC 1456717 || | |||||| ||||| | | ||||| ||| | |||||| |||| || || Sbjct 4137 GCAAC-GAGAAGTACTACAACTCCACGAACCCCTTCGACTTCATGGAGATGATTTCCCTG 4079 Query 1456718 GAGGGCAAGACCAA 1456731 | || |||||||| Sbjct 4078 CAAGGGAAGACCAA 4065 Score = 107 bits (118), Expect = 3e-17 Identities = 168/237 (71%), Gaps = 5/237 (2%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || ||||||||||| || || |||||||| |||||| | |||| Sbjct 5270 GATCTGGCAGATGTAC-AAGAAGGCCGAGGCGTCGTTCTGGACCGCGGAGGAGATGGACC 5212 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTG---TCGCTGAGCGACGACGAGCGCCATTTCATCA 1455891 | | |||| | | ||||| | ||| | |||| |||||||||| |||||| Sbjct 5211 TGTCCAAGGACATGCACGACTGGCAGAACAAGCTCAACGACAACGAGCGCCACTTCATCT 5152 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||||| |||||| || |||||||| ||| |||||||| ||||||||| || Sbjct 5151 CCCACGTGCTCGCC-TTCTTCGCCGCGTCCGACGGCATCGTCAACGAGAACCTCCTCGAG 5093 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008 ||||| |||||||| | | ||||| || | || || || ||||||||| Sbjct 5092 CGCTTCTCCGGCGAGGTCCAGGTCGCCGAGGCCCGCTGCTTCTATGGCTTCCAGATC 5036 >seq282 Length=9486 Score = 116 bits (128), Expect = 5e-20 Identities = 149/203 (73%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 333010 GTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTGCGGCAGATCAACCCTTTTCGA 333069 ||| |||||||||||||| | || |||||| ||||| | || || ||| ||||| Sbjct 2203 GTCCGCCTCGTCGAGGATTACGACCTTGTGCCGCCCCTCAGGGAGGGTGACCTTTTTCTG 2262 Query 333070 GGCGTGGTGTTTGATGATCTTGCGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAG 333129 || |||||||| | |||||||||||||| | |||||||||||| ||||||||||| Sbjct 2263 CGCAAACTGTTTGATCTTGTTGCGCACGACGTCGATGCCGCGCTCGTCGGACGCGTTGAG 2322 Query 333130 TTCGAGCACGGCCTCGTCGGCGGCCGCACCCAAGAGGACGCGCGCCAG-GCACGCGATGC 333188 ||||||||| |||| | | | || || | || || |||| || ||| | ||| Sbjct 2323 CTCGAGCACGCCCTCCTTGTACGACGGCCCGAGCAGCGCGTGCGCGAGCGCAAG-GATCG 2381 Query 333189 TCGTGGTCTTGCCCGTGCCGGGC 333211 ||| |||||||| | |||||| Sbjct 2382 ACGTCGTCTTGCCGATACCGGGC 2404 >seq2512 Length=16788 Score = 111 bits (122), Expect = 2e-18 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 259931 CTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAG 259990 ||||| || ||||||||||| | ||||||| ||||| ||||| || | |||||| Sbjct 7425 CTCTTCAACGCCGGCACGCCTCACCCGCAGCTGTCGTCTTGCTTCCTCGTCACGATGAAG 7366 Query 259991 GCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCG 260050 | || |||||||||||||| |||||||||||| ||||||| | ||||||||| || Sbjct 7365 GAGGACAGCATCGAGGGCATCTACGACACGCTCAAGACGTGCGCGATGATCTCCAAGACG 7306 Query 260051 GCCGGCGGCATCGG 260064 ||||| || ||||| Sbjct 7305 GCCGGTGGTATCGG 7292 Score = 102 bits (112), Expect = 1e-15 Identities = 151/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 261820 CTACCTGGAACCGTGGCACGCCGACCTCATCAACTGGCTGGACCTCAAAAAGAACCACGG 261879 |||| | || ||||||||||| ||| || || | | || ||||| ||||||||||| Sbjct 7019 CTACATCGAGCCGTGGCACGCGGACGTCTTCGAGTTCCTCGACCTGCGCAAGAACCACGG 6960 Query 261880 CAAGGGAGGGGGAGAACCGGGCGCGCGCGATCTCTTTTACGGCCTGTGGACGTGCGACCT 261939 ||||| |||| ||| ||||| | | ||||| |||| || |||| | |||||| Sbjct 6959 CAAGGA----GGAGGTCCGTGCGCGTG--ACCTCTTCTACGCGCTCTGGATGCCCGACCT 6906 Query 261940 GTTTATGCGCCGCATGGTGACCGGCCGCGACTGGTCGCTCTTTTGCCCGTCCGAGGCGCC 261999 |||||| ||| | | || | |||||| ||||||| ||||| ||||||| || Sbjct 6905 CTTTATGAAGCGCGTCGAGAAGAACGAGGACTGGCCGCTCTTCTGCCCTGCCGAGGCTCC 6846 Query 262000 CGGCCTGCACGAATGCTATGGCGCGGCCTTTGA 262032 ||||||||||| ||| ||| || ||||| Sbjct 6845 TGGCCTGCACGAGGTCTACGGCAAGGAGTTTGA 6813 Score = 96.9 bits (106), Expect = 5e-14 Identities = 144/201 (72%), Gaps = 10/201 (5%) Strand=Plus/Minus Query 263177 TCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCATTGATATGGCGG 263236 |||||| |||| ||||||||| |||||| | | | ||| ||| || | |||| Sbjct 5501 TCAAGGAGCTCTACAAGACCGTCTGGGAGATCAGCCAGAAGGTTGTCATCGACCTCGCGG 5442 Query 263237 CCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCG-----CCGA 263291 ||||||| | | | |||||||||||||| |||||| | ||||| |||| Sbjct 5441 CCGACCGTGGCGCGTTCATCGACCAGAGCCAGAGCCTCAACATCCACCTCCAGTCCCCGA 5382 Query 263292 CCCGACGGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCCTCAAGAC 263351 | | |||||| ||| |||| || |||||| |||||||||| ||||||||||| Sbjct 5381 CGC-ACGGCC---AGC-TCACTTCCATGCACTTCTATGCGTGGAAGAAGGGCCTCAAGAC 5327 Query 263352 TGGCATGTACTATCTGCGCAC 263372 ||||||||||| |||||||| Sbjct 5326 GGGCATGTACTACCTGCGCAC 5306 >seq1961 Length=2438 Score = 105 bits (116), Expect = 1e-16 Identities = 115/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 724988 GTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGCGCGCTCCAA 725047 ||| ||||||||||| |||| ||||||| | ||||||| || ||| | ||| Sbjct 1394 GTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCCAAGCTCGCGTCGTACAA 1453 Query 725048 CAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGG 725107 |||| || ||| | ||||||||||||||||||||||||| || ||| | | ||| Sbjct 1454 CAAGAAGTCGACCATCTCCTCGCGCGAGATCCAGACCGCCGTGCGTCTCATCCTCCCCGG 1513 Query 725108 CGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 ||| || ||| ||||||| ||||||||||||| Sbjct 1514 CGAGCTCTCCAAGCACGCCATCTCCGAGGGCAC 1546 >seq1 Length=97325 Score = 93.3 bits (102), Expect = 6e-13 Identities = 117/158 (74%), Gaps = 6/158 (4%) Strand=Plus/Minus Query 724988 GTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC---GCCTGGCGCGCTC 725044 ||| ||||||||||| |||| ||||||| | |||||| ||| || | | || | Sbjct 25754 GTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGC--GTCCAAGCTCGCCTCG-TA 25698 Query 725045 CAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCG 725104 ||||||| || ||| | | ||||| |||||||||||||| || || ||| | | Sbjct 25697 CAACAAGAAGTCGACCATCTCCTCCCGCGAAATCCAGACCGCCGTCCGTCTTATCCTCCC 25638 Query 725105 CGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||||| || ||| ||||||| ||||||||||||||| Sbjct 25637 CGGCGAGCTCTCCAAGCACGCCATCTCCGAGGGCACCA 25600 >seq108 Length=10729 Score = 91.5 bits (100), Expect = 2e-12 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 724988 GTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGCGCGCTCCAA 725047 ||| ||||||||||| | || ||||||| | ||||||| || ||| | ||| Sbjct 5307 GTTCGTCAACGACATCTTTGAACGCATCGCCGGCGAGGCCTCCAAGCTCGCGTCATACAA 5366 Query 725048 CAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGG 725107 |||| || ||| | | |||||||||||||||||||| || || ||| | | ||| Sbjct 5367 CAAGAAGTCGACCATCTCCTCCCGCGAGATCCAGACCGCCGTCCGTCTCATCCTTCCCGG 5426 Query 725108 CGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| || ||| ||||||| |||| |||||||||| Sbjct 5427 CGAGCTCTCCAAGCACGCCATCTCTGAGGGCACCA 5461 >seq905 Length=6081 Score = 86.0 bits (94), Expect = 9e-11 Identities = 113/155 (73%), Gaps = 4/155 (3%) Strand=Plus/Plus Query 724988 GTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC--CTGGCGCGCTCC 725045 ||| ||||||||||| |||| ||||||| |||||||| ||| || ||| | | Sbjct 3446 GTTCGTCAACGACATCTTCGAGCGCATCGCGACCGAGGC--GTCCAAGCTCGCGTCGTAC 3503 Query 725046 AACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGC 725105 |||||| ||| ||| | |||||||||||||| ||||| ||||| ||| | | | Sbjct 3504 AACAAGAAGTCCACCATCTCGTCCCGCGAGATCCAGACTGCCGTCCGCCTCATCCTCCCC 3563 Query 725106 GGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 ||||| || ||| |||||| |||| ||||| || Sbjct 3564 GGCGAGCTCTCCAAGCACGCGATCTCGGAGGGGAC 3598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177522616100704