Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq2870 91.5 1e-13 seq2247 86.0 6e-12 >seq2870 Length=12576 Score = 91.5 bits (100), Expect = 1e-13 Identities = 123/169 (73%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| || | | ||| || |||| || |||||||| || || || Sbjct 9886 CTCCTTCTGAATGTTGTAGTCCGAGAGGGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 9945 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||||||||| | || | || |||||||||| ||||| ||| | || Sbjct 9946 GATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGA-CGT 10004 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 || | | |||||| || || ||||| | |||||| || || || || Sbjct 10005 TGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATGGTCTTGCCTGT 10053 Score = 89.7 bits (98), Expect = 5e-13 Identities = 122/168 (73%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || |||||||| || | | ||| || |||| || |||||||| || || || Sbjct 9597 TCTTTCTGGATGTTGTAGTCCGAGAGGGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAG 9656 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| ||||||||||| | || | || |||||||||| |||||| ||| | ||| Sbjct 9657 ATCAAGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTT 9715 Query 35666 G-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 | | | |||||| || || ||||| | |||||| ||||| || || Sbjct 9716 GTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATGGTTTTGCCGGT 9763 >seq2247 Length=21484 Score = 86.0 bits (94), Expect = 6e-12 Identities = 110/149 (74%), Gaps = 2/149 (1%) Strand=Plus/Minus Query 35580 CGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCT 35639 |||| || |||||||| || || || |||| ||||||||||| | || | || ||||| Sbjct 11601 CGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCT 11542 Query 35640 TGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTG 35698 ||||| |||||| ||| | |||| | | |||||| || |||||||| | ||| Sbjct 11541 TGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTG 11483 Query 35699 ATCGTTTTACCCGTCAAAGTTTTCACAAA 35727 ||||| |||||||||| || || || || Sbjct 11482 ATCGTCTTACCCGTCAGGGTCTTGACGAA 11454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450776740319360