Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01-
21] 2,992 sequences; 32,128,072 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq2870 91.5 1e-13
seq2247 86.0 6e-12
>seq2870
Length=12576
Score = 91.5 bits (100), Expect = 1e-13
Identities = 123/169 (73%), Gaps = 2/169 (1%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| ||||||||||| || | | ||| || |||| || |||||||| || || ||
Sbjct 9886 CTCCTTCTGAATGTTGTAGTCCGAGAGGGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 9945
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||| ||||||||||| | || | || |||||||||| ||||| ||| | ||
Sbjct 9946 GATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGA-CGT 10004
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712
|| | | |||||| || || ||||| | |||||| || || || ||
Sbjct 10005 TGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATGGTCTTGCCTGT 10053
Score = 89.7 bits (98), Expect = 5e-13
Identities = 122/168 (73%), Gaps = 2/168 (1%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
|| || || |||||||| || | | ||| || |||| || |||||||| || || ||
Sbjct 9597 TCTTTCTGGATGTTGTAGTCCGAGAGGGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAG 9656
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
||||| ||||||||||| | || | || |||||||||| |||||| ||| | |||
Sbjct 9657 ATCAAGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTT 9715
Query 35666 G-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712
| | | |||||| || || ||||| | |||||| ||||| || ||
Sbjct 9716 GTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATGGTTTTGCCGGT 9763
>seq2247
Length=21484
Score = 86.0 bits (94), Expect = 6e-12
Identities = 110/149 (74%), Gaps = 2/149 (1%)
Strand=Plus/Minus
Query 35580 CGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCT 35639
|||| || |||||||| || || || |||| ||||||||||| | || | || |||||
Sbjct 11601 CGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCT 11542
Query 35640 TGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTG 35698
||||| |||||| ||| | |||| | | |||||| || |||||||| | |||
Sbjct 11541 TGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTG 11483
Query 35699 ATCGTTTTACCCGTCAAAGTTTTCACAAA 35727
||||| |||||||||| || || || ||
Sbjct 11482 ATCGTCTTACCCGTCAGGGTCTTGACGAA 11454
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450776740319360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |