Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq2870 105 2e-17 seq545 87.8 5e-12 >seq2870 Length=12576 Score = 105 bits (116), Expect = 2e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || ||||| || || ||||| || ||||| || || || Sbjct 9847 CATACCACCACGCAGACGGAGGACGAGATGGAGCGTCGACTCCTTCTGAATGTTGTAGTC 9906 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || ||||| || || ||||| ||||| | || ||||| ||||| Sbjct 9907 CGAGAGGGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGG 9966 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || |||||||| || || || || || || |||| || || | || Sbjct 9967 CGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTC 10026 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGT 140719 || || || || | ||||| || || || || Sbjct 10027 GACCTCGAGCGTGATGGTCTTGCCTGTGAGGGT 10059 >seq545 Length=28318 Score = 87.8 bits (96), Expect = 5e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 349231 TTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAG 349290 ||| |||| ||| ||||||||||| ||||| || || || || || || || || ||| | Sbjct 3676 TTGCGTTGGTGTCTGGCAAAATGACCGTGTCGAGATCATCGCCAACGACCAGGGCAACCG 3735 Query 349291 AACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGTATGATTGGTGA 349341 || || || || |||||||| || ||||| || |||||| |||| ||||| Sbjct 3736 GACCACCCCGTCCTACGTTGCCTTCACCGACACCGAGCGTCTGATCGGTGA 3786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515196312722576