Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq2512 159 4e-34 seq41 82.4 8e-11 >seq2512 Length=16788 Score = 159 bits (176), Expect = 4e-34 Identities = 250/350 (71%), Gaps = 16/350 (5%) Strand=Plus/Minus Query 20071 GGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCCGA 20130 ||||||||| || || ||||| ||||| ||||||| ||||||| |||||||||||||| Sbjct 6245 GGCGCGCAACTCCAACATGCGTCACCGCCCGATCGGCCTCGGCGTGCAGGGCCTGGCCGA 6186 Query 20131 CGTTTTC---ATGATGCTCGGCCTCTCATTCGACGATCCCAAGGCGCGCGAGCTCAACAA 20187 | ||| || |||| | || || | || || || ||| | || |||||||||| Sbjct 6185 CACGTTCCAGATCATGCGCTACCCCTTCT-CGTCGC-CCGAAGCCAAGC-AGCTCAACAA 6129 Query 20188 GGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCGAACTCGCCAAAGA 20247 | ||||||||| || | |||||||| || ||| || || ||| ||||| | | Sbjct 6128 GCAGATCTTCGAGACCATCTACCACGCCGCGCTCGAGGCGTCTGTCGAGCTCGCTATCGT 6069 Query 20248 GGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCCTCCAGCCGGA 20307 || ||| ||||| | | | | |||| ||||||||| | |||| | |||||| || Sbjct 6068 CGAGGGCACGTACTCGTCCTACGAGGGCTCGCCCGCGAGCAAGGGCGTTCTCCAGTACGA 6009 Query 20308 CATGTGGGGCGTCACTGAGAATGAGTTTTGG---AGCGCC---CTCAAGGTTGAGATCAA 20361 |||||||||||| || | || ||||| | ||| ||||||| ||||| Sbjct 6008 CATGTGGGGCGTAACCCCGTCCGACCTTTGGGACTGGGCCTCGCTCAAGGACAAGATC-- 5951 Query 20362 GACC--CACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGC 20409 | || ||||| || ||||||||| ||||||||||||| |||||||| || Sbjct 5950 GCCCAGCACGGTCTCCGCAACTCGCTGCTCGTCGCGCCGATGCCGACTGC 5901 Score = 127 bits (140), Expect = 2e-24 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 19500 TCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGG 19559 ||||| ||||||| ||||||||||||||| | || |||||||| |||||| |||||| | Sbjct 7020 TCTACATCGAGCCGTGGCACGCGGACGTCTTCGAGTTCCTCGACCTGCGCAAGAACCACG 6961 Query 19560 GTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCA 19619 | | |||||| | || || ||||||||| || | ||||| || ||||| || | Sbjct 6960 GCAAGGAGGAGGTCCGTGCGCGTGACCTCTTCTACGCGCTCTGGATGCCCGACCTCTTTA 6901 Query 19620 TGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCC 19679 || || || |||||| |||| || |||| || | ||||| ||| ||||||| Sbjct 6900 TGAAGCGCGTCGAGAAGAACGAGGACTGGCCGCTCTTCTGCCCTGCCGAGGCTCCTGGCC 6841 Query 19680 TACCCGACGTCTACGGCGAGGCGTT 19704 | | ||| ||||||||| ||| ||| Sbjct 6840 TGCACGAGGTCTACGGCAAGGAGTT 6816 Score = 123 bits (136), Expect = 3e-23 Identities = 145/196 (74%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 79309 CCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCC 79368 || ||||| ||| ||||||| || |||| ||||| | || |||||||||||| | Sbjct 6825 CCGTAGACCTCGTGCAGGCCAGGAGCCTCGGCAGGGCAGAAGAGCGGCCAGTCCTCGTTC 6884 Query 79369 TTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAA 79428 ||||| || || ||| |||||||| || ||||| || || ||||||||| || | Sbjct 6885 TTCTCGACGCGCTTCATAAAGAGGTCGGGCATCCAGAGCGCGTAGAAGAGGTCACGCGCA 6944 Query 79429 CGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGC 79488 || | |||||| | ||| |||||| ||||| ||||| || || | || ||| |||||| Sbjct 6945 CGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGGAACTCGAAGACGTCCGCGTGC 7004 Query 79489 CACGGCTCCAGATAGA 79504 |||||||| | |||| Sbjct 7005 CACGGCTCGATGTAGA 7020 Score = 123 bits (136), Expect = 3e-23 Identities = 109/136 (80%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 19215 CCCTTTTCAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGA 19274 |||| ||||||||||| ||| |||||||| ||||| || ||||| || | |||| Sbjct 7427 CCCTCTTCAACGCCGGCACGCCTCACCCGCAGCTGTCGTCTTGCTTCCTCGTCACGATGA 7368 Query 19275 AGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGT 19334 |||| |||||||| |||||||||||||| ||||||||| ||||||| ||||||||| Sbjct 7367 AGGAGGACAGCATCGAGGGCATCTACGACACGCTCAAGACGTGCGCGATGATCTCCAAGA 7308 Query 19335 GGTCCGGGGGTATCGG 19350 | |||| |||||||| Sbjct 7307 CGGCCGGTGGTATCGG 7292 Score = 120 bits (132), Expect = 3e-22 Identities = 108/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 79654 CCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCC 79713 ||||| || |||| | ||||||||| ||||||| ||||||||| |||||||||||| Sbjct 7292 CCGATACCACCGGCCGTCTTGGAGATCATCGCGCACGTCTTGAGCGTGTCGTAGATGCCC 7351 Query 79714 TCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTA 79773 ||||| ||| |||||||| | ||| |||||||| ||||| ||| |||| ||| Sbjct 7352 TCGATGCTGTCCTCCTTCATCGTGACGAGGAAGCAAGACGACAGCTGCGGGTGAGGCGTG 7411 Query 79774 CCGGCGTTGAAGAGGG 79789 |||||||||||||||| Sbjct 7412 CCGGCGTTGAAGAGGG 7427 Score = 114 bits (126), Expect = 1e-20 Identities = 151/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 20609 CCCCAGAACCTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATC 20668 ||| || || ||||||| | |||| |||||| ||||| ||| |||||| ||||| Sbjct 5511 CCCGAGGACATCAAGGAGCTCTACAAGACCGTCTGGGAGATCAGCCAGAAGGTTGTCATC 5452 Query 20669 GACATGGCGGCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATG 20728 ||| | |||||||| || ||||| | |||||||||| |||| ||||| || | | Sbjct 5451 GACCTCGCGGCCGACCGTGGCGCGTTCATCGACCAGAGCCAGAGCCTCAACATCCACCTC 5392 Query 20729 GAGAATCCGA-GCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCT 20787 || |||| || ||| | ||| | |||||||| | || | ||| | ||||| || Sbjct 5391 CAGTCCCCGACGCACGGCCA-GCTCACTTCCATGCACTTCTATGCGTGGAAGAAGGGCCT 5333 Query 20788 CAAGACGGGCATGTACTATCTGCGGAC 20814 |||||||||||||||||| ||||| || Sbjct 5332 CAAGACGGGCATGTACTACCTGCGCAC 5306 Score = 113 bits (124), Expect = 5e-20 Identities = 133/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 || |||| |||||||||||||||||||| ||||||||||| | || | |||||| Sbjct 5306 GTGCGCAGGTAGTACATGCCCGTCTTGAGGCCCTTCTTCCACGCATAGAAGTGCATGGAA 5365 Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATG 78309 | |||| | | | ||||| || | | ||||||||| |||| |||||||||| Sbjct 5366 GTGAGCTGGCCGTGCGTCGGGGACTGGAGGTGGATGTTGAGGCTCTGGCTCTGGTCGATG 5425 Query 78310 TACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTC 78369 |||| || ||||||||||| | ||||||||| ||| || |||||||||| |||| Sbjct 5426 AACGCGCCACGGTCGGCCGCGAGGTCGATGACAACCTTCTGGCTGATCTCCCAGACGGTC 5485 >seq41 Length=11186 Score = 82.4 bits (90), Expect = 8e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 60039 ATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATT 60098 || |||||||| || ||||||||||||||||| ||||| | ||||| || ||||| || Sbjct 4545 ATCTTCTGGCTTAAGAAGCGTGGCCTCATGCCCGGCCTTACCTTCTCGAATGAGCTCATC 4486 Query 60099 TCCCGGGACGAGGGCCTCCA 60118 ||||| |||||||| || || Sbjct 4485 TCCCGCGACGAGGGTCTGCA 4466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548504285172480