Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq2512 111 2e-19 >seq2512 Length=16788 Score = 111 bits (122), Expect = 2e-19 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 53292 CCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGA 53351 |||| |||||||| || ||| |||||| ||| ||||| |||||||| || |||||| Sbjct 7427 CCCTCTTCAACGCCGGCACGCCTCACCCGCAGCTGTCGTCTTGCTTCCTCGTCACGATGA 7368 Query 53352 AGGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGT 53411 |||| ||| ||||| ||||||||||| ||||||||| ||| || ||||||||| Sbjct 7367 AGGAGGACAGCATCGAGGGCATCTACGACACGCTCAAGACGTGCGCGATGATCTCCAAGA 7308 Query 53412 GGTCGGGTGGTATCGG 53427 | | ||||||||||| Sbjct 7307 CGGCCGGTGGTATCGG 7292 Score = 109 bits (120), Expect = 6e-19 Identities = 152/208 (73%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 53577 TCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGG 53636 ||||| |||||||||||||||| ||| | | ||||| ||||| ||||| ||| || | Sbjct 7020 TCTACATCGAGCCGTGGCACGCGGACGTCTTCGAGTTCCTCGACCTGCGCAAGAACCACG 6961 Query 53637 GTGACGAAGAGATGCGCTGC-CGTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTT 53694 | | || ||| | || ||| |||||||| || ||| || || ||||| || |||||||| Sbjct 6960 GCAAGGAGGAGGTCCG-TGCGCGTGACCTCTTCTAC-GCGCTCTGGATGCCCGACCTCTT 6903 Query 53695 CATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGG 53754 ||| | || |||||| ||||||| ||| || | ||||| |||| || || Sbjct 6902 TATGAAGCGCGTCGAGAAGAACGAGGACTGGCCGCTCTTCTGCCCTGCCGAGGCTCCTGG 6843 Query 53755 CCTCCAGGGTGTCTACGGTGAGGAGTTT 53782 ||| || | |||||||| |||||||| Sbjct 6842 CCTGCACGAGGTCTACGGCAAGGAGTTT 6815 Score = 96.9 bits (106), Expect = 4e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTG 55787 |||||||| | ||| ||| || |||||||| |||||| | | || ||| | | Sbjct 5501 TCAAGGAGCTCTACAAGACCGTCTGGGAGATCAGCCAGAAGGTTGTCATCGACCTCGCGG 5442 Query 55788 CTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTT 55847 | || ||||| |||| |||||||||| |||| || |||||| | | || || Sbjct 5441 CCGACCGTGGCGCGTTCATCGACCAGAGCCAGAGCCTCAACATCCACCTCCAGTCCCCGA 5382 Query 55848 CACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTA 55907 | | | | || | | || |||||||| || | |||||||||||| ||||||||||| | Sbjct 5381 CGCACGGCCAGCTCACTTCCATGCACTTCTATGCGTGGAAGAAGGGCCTCAAGACGGGCA 5322 Query 55908 TGTACTATCTGCGGAC 55923 ||||||| ||||| || Sbjct 5321 TGTACTACCTGCGCAC 5306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547195534121600