Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01-
21] 2,992 sequences; 32,128,072 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq2512 111 2e-19
>seq2512
Length=16788
Score = 111 bits (122), Expect = 2e-19
Identities = 106/136 (78%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 53292 CCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGA 53351
|||| |||||||| || ||| |||||| ||| ||||| |||||||| || ||||||
Sbjct 7427 CCCTCTTCAACGCCGGCACGCCTCACCCGCAGCTGTCGTCTTGCTTCCTCGTCACGATGA 7368
Query 53352 AGGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGT 53411
|||| ||| ||||| ||||||||||| ||||||||| ||| || |||||||||
Sbjct 7367 AGGAGGACAGCATCGAGGGCATCTACGACACGCTCAAGACGTGCGCGATGATCTCCAAGA 7308
Query 53412 GGTCGGGTGGTATCGG 53427
| | |||||||||||
Sbjct 7307 CGGCCGGTGGTATCGG 7292
Score = 109 bits (120), Expect = 6e-19
Identities = 152/208 (73%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 53577 TCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGG 53636
||||| |||||||||||||||| ||| | | ||||| ||||| ||||| ||| || |
Sbjct 7020 TCTACATCGAGCCGTGGCACGCGGACGTCTTCGAGTTCCTCGACCTGCGCAAGAACCACG 6961
Query 53637 GTGACGAAGAGATGCGCTGC-CGTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTT 53694
| | || ||| | || ||| |||||||| || ||| || || ||||| || ||||||||
Sbjct 6960 GCAAGGAGGAGGTCCG-TGCGCGTGACCTCTTCTAC-GCGCTCTGGATGCCCGACCTCTT 6903
Query 53695 CATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGG 53754
||| | || |||||| ||||||| ||| || | ||||| |||| || ||
Sbjct 6902 TATGAAGCGCGTCGAGAAGAACGAGGACTGGCCGCTCTTCTGCCCTGCCGAGGCTCCTGG 6843
Query 53755 CCTCCAGGGTGTCTACGGTGAGGAGTTT 53782
||| || | |||||||| ||||||||
Sbjct 6842 CCTGCACGAGGTCTACGGCAAGGAGTTT 6815
Score = 96.9 bits (106), Expect = 4e-15
Identities = 139/196 (71%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTG 55787
|||||||| | ||| ||| || |||||||| |||||| | | || ||| | |
Sbjct 5501 TCAAGGAGCTCTACAAGACCGTCTGGGAGATCAGCCAGAAGGTTGTCATCGACCTCGCGG 5442
Query 55788 CTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTT 55847
| || ||||| |||| |||||||||| |||| || |||||| | | || ||
Sbjct 5441 CCGACCGTGGCGCGTTCATCGACCAGAGCCAGAGCCTCAACATCCACCTCCAGTCCCCGA 5382
Query 55848 CACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTA 55907
| | | | || | | || |||||||| || | |||||||||||| ||||||||||| |
Sbjct 5381 CGCACGGCCAGCTCACTTCCATGCACTTCTATGCGTGGAAGAAGGGCCTCAAGACGGGCA 5322
Query 55908 TGTACTATCTGCGGAC 55923
||||||| ||||| ||
Sbjct 5321 TGTACTACCTGCGCAC 5306
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547195534121600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |