Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01-
21] 2,992 sequences; 32,128,072 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq305 141 1e-28
seq2870 136 5e-27
seq2247 105 8e-18
seq2900 102 9e-17
seq278 100 3e-16
seq223 100 3e-16
seq2512 87.8 2e-12
>seq305
Length=9259
Score = 141 bits (156), Expect = 1e-28
Identities = 158/211 (75%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 27422 AGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATT 27481
|||| || ||||||||||| || || || ||||| ||||| || | || | ||
Sbjct 8078 AGACCCTCACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGACACGATCGACAACG 8019
Query 27482 TGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTG 27541
| ||||| || || ||||||||||| || || || || ||||||||||| || || || |
Sbjct 8018 TCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCGCCCGACCAGCAGCGCCTCATCTTCG 7959
Query 27542 CTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCA 27601
|||| ||||| |||||||| | || ||||| | ||||| || |||| ||||| || |
Sbjct 7958 CTGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGA 7899
Query 27602 CTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || || || ||| ||||||| ||||||||
Sbjct 7898 CGCTCCACCTCGTCCTGCGTCTCCGCGGTGG 7868
>seq2870
Length=12576
Score = 136 bits (150), Expect = 5e-27
Identities = 159/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 27422 AGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATT 27481
|||| || |||||||| || || || || ||||||||||| || | || | ||
Sbjct 9771 AGACCCTCACCGGCAAAACCATCACGCTCGAGGTTGAGTCCTCGGACACGATCGACAACG 9712
Query 27482 TGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTG 27541
| ||||| || || |||||||||||||| || || || ||||||||||| | || || |
Sbjct 9711 TCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCTTGATCTTCG 9652
Query 27542 CTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCA 27601
|||| ||||| || ||||| | || ||||| | ||||| || |||| || ||||| |
Sbjct 9651 CTGGCAAGCAGCTTGAGGACGGCCGGACCCTCTCGGACTACAACATCCAGAAAGAATCGA 9592
Query 27602 CTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636
| || || || ||| | ||||||||||| || |||
Sbjct 9591 CGCTCCACCTCGTCCTCCGTCTTCGCGGCGGCCAA 9557
Score = 129 bits (142), Expect = 7e-25
Identities = 155/211 (73%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 27422 AGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATT 27481
|||| || || |||||||| || || || ||||| ||||| || | || | ||
Sbjct 10061 AGACCCTCACAGGCAAGACCATCACGCTCGAGGTCGAGTCCTCGGACACGATCGACAACG 10002
Query 27482 TGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTG 27541
| ||||| || ||||||||||||||||| || || || ||||||||||| | || || |
Sbjct 10001 TCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAGCAGCGCTTGATCTTCG 9942
Query 27542 CTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCA 27601
|||| ||||| || ||||| | || ||||| | ||||| || | || ||||| || |
Sbjct 9941 CTGGCAAGCAGCTTGAGGACGGCCGGACCCTCTCGGACTACAACATTCAGAAGGAGTCGA 9882
Query 27602 CTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || ||||| ||| | ||||| || |||||
Sbjct 9881 CGCTCCATCTCGTCCTCCGTCTGCGTGGTGG 9851
>seq2247
Length=21484
Score = 105 bits (116), Expect = 8e-18
Identities = 111/146 (76%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| |||||||| || || || ||||| || || || ||||| ||||| || | |||
Sbjct 11454 TTCGTCAAGACCCTGACGGGTAAGACGATCACCCTCGAGGTGGAGTCTTCCGACACCATC 11513
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| || | ||||| || || |||||||||||||| || || || ||||||||||| ||
Sbjct 11514 GACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGCCTG 11573
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGA 27560
|| || ||||| ||||| ||||||||
Sbjct 11574 ATCTTCGCTGGCAAGCAGCTCGAGGA 11599
>seq2900
Length=32347
Score = 102 bits (112), Expect = 9e-17
Identities = 106/139 (76%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 27422 AGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATT 27481
|||| || || |||||||| || || || ||||| ||||| || | ||| | ||
Sbjct 25989 AGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCGGACACCATCGACAACG 25930
Query 27482 TGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTG 27541
| ||||| || || |||||||||||||| || || || ||||||||||| || || ||||
Sbjct 25929 TCAAGGCAAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGCCTCATCTTTG 25870
Query 27542 CTGGTAAGCAACTCGAGGA 27560
| || ||||| ||||||||
Sbjct 25869 CCGGCAAGCAGCTCGAGGA 25851
>seq278
Length=9506
Score = 100 bits (110), Expect = 3e-16
Identities = 112/150 (75%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 27422 AGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATT 27481
|||| || ||||||||||| || || || ||||| ||||| || | || | |||
Sbjct 9357 AGACCCTCACCGGCAAGACCATCACGCTCGAGGTCGAGTCCTCGGACACGATCGACAATG 9416
Query 27482 TGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTG 27541
| ||||| || || |||||||||||||| || || || ||||||||||| | || || |
Sbjct 9417 TCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCTTGATCTTCG 9476
Query 27542 CTGGTAAGCAACTCGAGGATGATCGTACCC 27571
|||| ||||| || ||||| | || ||||
Sbjct 9477 CTGGCAAGCAGCTTGAGGACGGCCGGACCC 9506
>seq223
Length=52679
Score = 100 bits (110), Expect = 3e-16
Identities = 133/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 31195 ATTACGGGAATTCCGAAGCTCGACGACGCCAACTGGGCCGGTACCCACAAGTCGCACGAG 31254
|| || || || ||||||||||| ||||||||| |||| || || | | |||| ||
Sbjct 4737 ATCACCGGCATCCCGAAGCTCGAGGACGCCAACAGGGCGGGCACGAAGGACGGGCACAAG 4796
Query 31255 TGCACGCTTATTATTACCGAGGGTGACTCGGCAAAGGCGCTTGCTATTGCTGGCTTGAGT 31314
|||||||| || | ||||| || |||||||| ||| |||| || | | ||| | |
Sbjct 4797 TGCACGCTCATCCTGACCGAAGGAGACTCGGCCAAGACGCTCGCCGTCACGGGCCTCGGC 4856
Query 31315 GTTGTGGGGCGCAATGCGTTCGGGGTGTTTCCGCTCCGAGGCAAGCCGCGTAACGTTCGT 31374
|| || || ||| | ||||| || || |||||||| ||||||| | ||||| ||
Sbjct 4857 GTCGTCGGCCGCGACCACTTCGGCGTCTTCCCGCTCCGCGGCAAGCTCCTCAACGTCCGC 4916
Query 31375 GACGC 31379
|||||
Sbjct 4917 GACGC 4921
>seq2512
Length=16788
Score = 87.8 bits (96), Expect = 2e-12
Identities = 104/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 80037 CGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGA 80096
||| ||||| |||||||||||||||||||||||||||||||| | || | |||||| ||
Sbjct 5305 CGTGCGCAGGTAGTACATGCCCGTCTTGAGGCCCTTCTTCCACGCATAGAAGTGCATGGA 5364
Query 80097 ACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGAT 80156
| |||||| | | || ||| || | | |||||| || ||| ||| |||
Sbjct 5365 AGTGAGCTGGCCGTGCGTCGGGGACTGGAGGTGGATGTTGAGGCTCTGGCTCTGGTCGAT 5424
Query 80157 GAAAGCCCCACGATCTGCCGC 80177
||| || ||||| || |||||
Sbjct 5425 GAACGCGCCACGGTCGGCCGC 5445
Score = 87.8 bits (96), Expect = 2e-12
Identities = 183/264 (69%), Gaps = 8/264 (3%)
Strand=Plus/Plus
Query 80539 CCCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTAC 80598
||||||||||||| ||| | | ||||| ||| || || ||| || | | | ||||
Sbjct 6000 CCCCACATGTCGTACTGGAGAACGCCCTTGCTCGCGGGCGAGCCCTCGTAGGACGAGTAC 6059
Query 80599 GGGCCCTCCGTCTTGGCCAGCTC-ACACGACTCCATAAGGGCCGCGTGATAAATGCACTC 80657
| |||||| | || ||||| ||| ||| || || || ||||| || ||| |||
Sbjct 6060 GTGCCCTCGACGATAGCGAGCTCGACA-GACGCCTCGAGCGCGGCGTGGTAGATGGTCTC 6118
Query 80658 AAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGA--ACGACAAGCCCATCATC 80715
|||| |||||| | | || | || ||| || ||| | | ||| ||| |||
Sbjct 6119 GAAGATCTGCTTGTTGAG-CTGCTTGGCTTCGGG-CGACGAGAAGGGGTAGCGCATGATC 6176
Query 80716 ATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGA- 80774
|||| ||| ||||||||||| ||||||| | ||||||||||||| ||| |||| ||
Sbjct 6177 TGGAACGTGTCGGCCAGGCCCTGCACGCCGAGGCCGATCGGGCGGTGACGCATGTTGGAG 6236
Query 80775 TCGCTCGGCCTCCGGAATTGGGTA 80798
| || | ||||| || | |||||
Sbjct 6237 TTGCGC-GCCTCAGGGACGGGGTA 6259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570289070391040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |