Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq305 141 1e-28 seq2870 136 5e-27 seq2247 105 8e-18 seq2900 102 9e-17 seq278 100 3e-16 seq223 100 3e-16 seq2512 87.8 2e-12 >seq305 Length=9259 Score = 141 bits (156), Expect = 1e-28 Identities = 158/211 (75%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 27422 AGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATT 27481 |||| || ||||||||||| || || || ||||| ||||| || | || | || Sbjct 8078 AGACCCTCACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGACACGATCGACAACG 8019 Query 27482 TGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTG 27541 | ||||| || || ||||||||||| || || || || ||||||||||| || || || | Sbjct 8018 TCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCGCCCGACCAGCAGCGCCTCATCTTCG 7959 Query 27542 CTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCA 27601 |||| ||||| |||||||| | || ||||| | ||||| || |||| ||||| || | Sbjct 7958 CTGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGA 7899 Query 27602 CTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || || || ||| ||||||| |||||||| Sbjct 7898 CGCTCCACCTCGTCCTGCGTCTCCGCGGTGG 7868 >seq2870 Length=12576 Score = 136 bits (150), Expect = 5e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27422 AGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATT 27481 |||| || |||||||| || || || || ||||||||||| || | || | || Sbjct 9771 AGACCCTCACCGGCAAAACCATCACGCTCGAGGTTGAGTCCTCGGACACGATCGACAACG 9712 Query 27482 TGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTG 27541 | ||||| || || |||||||||||||| || || || ||||||||||| | || || | Sbjct 9711 TCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCTTGATCTTCG 9652 Query 27542 CTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCA 27601 |||| ||||| || ||||| | || ||||| | ||||| || |||| || ||||| | Sbjct 9651 CTGGCAAGCAGCTTGAGGACGGCCGGACCCTCTCGGACTACAACATCCAGAAAGAATCGA 9592 Query 27602 CTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636 | || || || ||| | ||||||||||| || ||| Sbjct 9591 CGCTCCACCTCGTCCTCCGTCTTCGCGGCGGCCAA 9557 Score = 129 bits (142), Expect = 7e-25 Identities = 155/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 27422 AGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATT 27481 |||| || || |||||||| || || || ||||| ||||| || | || | || Sbjct 10061 AGACCCTCACAGGCAAGACCATCACGCTCGAGGTCGAGTCCTCGGACACGATCGACAACG 10002 Query 27482 TGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTG 27541 | ||||| || ||||||||||||||||| || || || ||||||||||| | || || | Sbjct 10001 TCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAGCAGCGCTTGATCTTCG 9942 Query 27542 CTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCA 27601 |||| ||||| || ||||| | || ||||| | ||||| || | || ||||| || | Sbjct 9941 CTGGCAAGCAGCTTGAGGACGGCCGGACCCTCTCGGACTACAACATTCAGAAGGAGTCGA 9882 Query 27602 CTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| ||| | ||||| || ||||| Sbjct 9881 CGCTCCATCTCGTCCTCCGTCTGCGTGGTGG 9851 >seq2247 Length=21484 Score = 105 bits (116), Expect = 8e-18 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| || || || ||||| || || || ||||| ||||| || | ||| Sbjct 11454 TTCGTCAAGACCCTGACGGGTAAGACGATCACCCTCGAGGTGGAGTCTTCCGACACCATC 11513 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | || | ||||| || || |||||||||||||| || || || ||||||||||| || Sbjct 11514 GACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGCCTG 11573 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGA 27560 || || ||||| ||||| |||||||| Sbjct 11574 ATCTTCGCTGGCAAGCAGCTCGAGGA 11599 >seq2900 Length=32347 Score = 102 bits (112), Expect = 9e-17 Identities = 106/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 27422 AGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATT 27481 |||| || || |||||||| || || || ||||| ||||| || | ||| | || Sbjct 25989 AGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCGGACACCATCGACAACG 25930 Query 27482 TGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTG 27541 | ||||| || || |||||||||||||| || || || ||||||||||| || || |||| Sbjct 25929 TCAAGGCAAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGCCTCATCTTTG 25870 Query 27542 CTGGTAAGCAACTCGAGGA 27560 | || ||||| |||||||| Sbjct 25869 CCGGCAAGCAGCTCGAGGA 25851 >seq278 Length=9506 Score = 100 bits (110), Expect = 3e-16 Identities = 112/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 27422 AGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATT 27481 |||| || ||||||||||| || || || ||||| ||||| || | || | ||| Sbjct 9357 AGACCCTCACCGGCAAGACCATCACGCTCGAGGTCGAGTCCTCGGACACGATCGACAATG 9416 Query 27482 TGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTG 27541 | ||||| || || |||||||||||||| || || || ||||||||||| | || || | Sbjct 9417 TCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCTTGATCTTCG 9476 Query 27542 CTGGTAAGCAACTCGAGGATGATCGTACCC 27571 |||| ||||| || ||||| | || |||| Sbjct 9477 CTGGCAAGCAGCTTGAGGACGGCCGGACCC 9506 >seq223 Length=52679 Score = 100 bits (110), Expect = 3e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 31195 ATTACGGGAATTCCGAAGCTCGACGACGCCAACTGGGCCGGTACCCACAAGTCGCACGAG 31254 || || || || ||||||||||| ||||||||| |||| || || | | |||| || Sbjct 4737 ATCACCGGCATCCCGAAGCTCGAGGACGCCAACAGGGCGGGCACGAAGGACGGGCACAAG 4796 Query 31255 TGCACGCTTATTATTACCGAGGGTGACTCGGCAAAGGCGCTTGCTATTGCTGGCTTGAGT 31314 |||||||| || | ||||| || |||||||| ||| |||| || | | ||| | | Sbjct 4797 TGCACGCTCATCCTGACCGAAGGAGACTCGGCCAAGACGCTCGCCGTCACGGGCCTCGGC 4856 Query 31315 GTTGTGGGGCGCAATGCGTTCGGGGTGTTTCCGCTCCGAGGCAAGCCGCGTAACGTTCGT 31374 || || || ||| | ||||| || || |||||||| ||||||| | ||||| || Sbjct 4857 GTCGTCGGCCGCGACCACTTCGGCGTCTTCCCGCTCCGCGGCAAGCTCCTCAACGTCCGC 4916 Query 31375 GACGC 31379 ||||| Sbjct 4917 GACGC 4921 >seq2512 Length=16788 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 80037 CGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGA 80096 ||| ||||| |||||||||||||||||||||||||||||||| | || | |||||| || Sbjct 5305 CGTGCGCAGGTAGTACATGCCCGTCTTGAGGCCCTTCTTCCACGCATAGAAGTGCATGGA 5364 Query 80097 ACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGAT 80156 | |||||| | | || ||| || | | |||||| || ||| ||| ||| Sbjct 5365 AGTGAGCTGGCCGTGCGTCGGGGACTGGAGGTGGATGTTGAGGCTCTGGCTCTGGTCGAT 5424 Query 80157 GAAAGCCCCACGATCTGCCGC 80177 ||| || ||||| || ||||| Sbjct 5425 GAACGCGCCACGGTCGGCCGC 5445 Score = 87.8 bits (96), Expect = 2e-12 Identities = 183/264 (69%), Gaps = 8/264 (3%) Strand=Plus/Plus Query 80539 CCCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTAC 80598 ||||||||||||| ||| | | ||||| ||| || || ||| || | | | |||| Sbjct 6000 CCCCACATGTCGTACTGGAGAACGCCCTTGCTCGCGGGCGAGCCCTCGTAGGACGAGTAC 6059 Query 80599 GGGCCCTCCGTCTTGGCCAGCTC-ACACGACTCCATAAGGGCCGCGTGATAAATGCACTC 80657 | |||||| | || ||||| ||| ||| || || || ||||| || ||| ||| Sbjct 6060 GTGCCCTCGACGATAGCGAGCTCGACA-GACGCCTCGAGCGCGGCGTGGTAGATGGTCTC 6118 Query 80658 AAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGA--ACGACAAGCCCATCATC 80715 |||| |||||| | | || | || ||| || ||| | | ||| ||| ||| Sbjct 6119 GAAGATCTGCTTGTTGAG-CTGCTTGGCTTCGGG-CGACGAGAAGGGGTAGCGCATGATC 6176 Query 80716 ATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGA- 80774 |||| ||| ||||||||||| ||||||| | ||||||||||||| ||| |||| || Sbjct 6177 TGGAACGTGTCGGCCAGGCCCTGCACGCCGAGGCCGATCGGGCGGTGACGCATGTTGGAG 6236 Query 80775 TCGCTCGGCCTCCGGAATTGGGTA 80798 | || | ||||| || | ||||| Sbjct 6237 TTGCGC-GCCTCAGGGACGGGGTA 6259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570289070391040