Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq2364 122 7e-23 seq2869 89.7 4e-13 >seq2364 Length=19119 Score = 122 bits (134), Expect = 7e-23 Identities = 234/340 (69%), Gaps = 4/340 (1%) Strand=Plus/Minus Query 30119 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 30178 |||||||| |||| || ||||| | || || ||||| | ||| || | ||| Sbjct 17430 GGGTTCCAAGCGCTCAAAATGATCCTCCGATCCGTCGGGTTCTCCCTAATCTTCTTGACG 17371 Query 30179 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTG-TACTC 30237 | | |||||||| ||||| ||| |||| || || || || || | ||| | Sbjct 17370 ACCTCGTGCAGCTGGTCCACTCCCTTCCCACTATAATCCGCT-TCGCACCCCTCATACGC 17312 Query 30238 TGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTG 30297 || || || ||||||||||||||||| ||||| || || || || ||||| |||||| Sbjct 17311 CGCCCCAAAGTGCCTCCACTGGAACCCATACACGGGCCCGAGATCCCCCTCCCGCCTGTG 17252 Query 30298 CTCGAAGCCCCT-CTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCC 30356 | | | |||||| ||| |||| || || | || || || |||||||||| | | | Sbjct 17251 CCCCA-GCCCCTGCTTCTCCAGGAACTCCTTCGAGCCATTCCCGTCCCAGATGTGAATTC 17193 Query 30357 CCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCA 30416 |||| |||||||||| | || || ||||| | |||||||| || |||||||| | Sbjct 17192 CCTTTGCAGAGAGCTCGAGAGCGTCCGTCGACCCCCGCACGAACCATAGGAGCTCCTCGA 17133 Query 30417 CGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 ||| | | ||||| | |||||||||||| || || Sbjct 17132 GCACGCCGCGCAGGAAGACGCGCTTGGTCGTGAGCAGCGG 17093 >seq2869 Length=12581 Score = 89.7 bits (98), Expect = 4e-13 Identities = 110/145 (76%), Gaps = 4/145 (3%) Strand=Plus/Plus Query 52765 AGATGGGCGACAAGTTTGCGTCGT-TCACGGCGCAAAAGGGGACGTGCGGAGCCGTCCTG 52823 ||| |||||| ||||| |||||| |||||| ||| |||||||| ||| | ||| Sbjct 4971 AGACGGGCGATAAGTTCGCGTCGCGTCACGG-GCAGAAGGGGACAATCGGCATCA-CCTA 5028 Query 52824 ACCCAG-GAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCC 52882 | || || |||||||||||| | ||||| || ||||||||||||||||||||| Sbjct 5029 CCGCACCGAAGACATGCCCTTCACCGCCGACGGCGTCACGCCCGACCTCATCATCAACCC 5088 Query 52883 CCACGCCTTTCCCTCCAGGATGACC 52907 ||||||| | ||||| | |||||| Sbjct 5089 CCACGCCATCCCCTCGCGCATGACC 5113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406295583891264