Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01-
21] 2,992 sequences; 32,128,072 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq2870 104 2e-17
seq305 93.3 4e-14
>seq2870
Length=12576
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 27006 ACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTC 27065
|| || || |||||| | || || || || || || | || ||| |||| || | |||
Sbjct 10059 ACCCTCACAGGCAAGACCATCACGCTCGAGGTCGAGTCCTCGGACACGATCGACAACGTC 10000
Query 27066 AAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCC 27125
|| || ||||| ||||| || ||||| || || || || ||||| || || | |||
Sbjct 9999 AAGGCCAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAGCAGCGCTTGATCTTCGCT 9940
Query 27126 GGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACC 27185
||||| || | || ||| | |||| | || || ||||||||||| |||||||||||
Sbjct 9939 GGCAAGCAGCTTGAGGACGGCCGGACCCTCTCGGACTACAACATTCAGAAGGAGTCGACG 9880
Query 27186 TTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
| ||| | || | ||| |||| ||||| ||
Sbjct 9879 CTCCATCTCGTCCTCCGTCTGCGTGGTGGTAT 9848
>seq305
Length=9259
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 27006 ACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTC 27065
|| || ||||||||| | || || || || || || | || ||| |||| || | |||
Sbjct 8076 ACCCTCACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCGGACACGATCGACAACGTC 8017
Query 27066 AAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCC 27125
|| || || || ||||| ||||| || || ||||| || ||||| | || | |||
Sbjct 8016 AAGGCCAAGATCCAGGACAAGGAAGGTATCCCGCCCGACCAGCAGCGCCTCATCTTCGCT 7957
Query 27126 GGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACC 27185
||||| || | || ||| | ||| |||| || |||||||| || |||||||||||
Sbjct 7956 GGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACG 7897
Query 27186 TTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
| || | || ||||| | || |||||
Sbjct 7896 CTCCACCTCGTCCTGCGTCTCCGCGGTGG 7868
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434902134051840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |