Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01-
21] 2,992 sequences; 32,128,072 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq2364 154 1e-32
>seq2364
Length=19119
Score = 154 bits (170), Expect = 1e-32
Identities = 245/346 (71%), Gaps = 14/346 (4%)
Strand=Plus/Plus
Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282
|||||||| ||||| || || || | | | |||||| |||||||||| || ||||||
Sbjct 17093 CCGCTGCTCACGACCAAGCGCGTCTTCCTGCGCGGCGTGCTCGAGGAGCTCCTATGGTTC 17152
Query 34283 GTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCT 34342
||| ||||| | ||| || | |||||||| | ||| | | ||||||||||
Sbjct 17153 GTGCGGGGGTCGACGGACGCTCTCGAGCTCTCTGCAAAGGGAATTCACATCTGGGACGGG 17212
Query 34343 CACGGGTCTCGA--GACTTTCTGGACAAGCGGGGGTT----CCCATCTCGGGAGGAGGGC 34396
| || ||||| || || ||||| |||| |||| | | || || ||||||
Sbjct 17213 AATGG--CTCGAAGGAGTTCCTGGAGAAGCAGGGGCTGGGGCACA----GGCGGGAGGGG 17266
Query 34397 GA-CTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAG 34455
|| || ||||||| | || |||||||||||||| ||||||||||||| |||| |||| |
Sbjct 17267 GATCTCGGGCCCG-TGTATGGGTTCCAGTGGAGGCACTTTGGGGCGGCGTATGAGGGGTG 17325
Query 34456 CGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAA 34515
||||||||| ||| || |||||| |||||||||||| | || || | | | |
Sbjct 17326 CGAAGCGGATTATAGTGGGAAGGGAGTGGACCAGCTGCACGAGGTCGTCAAGAAGATTAG 17385
Query 34516 GCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCG 34561
| |||||| || | |||||| | || |||| |||||||||
Sbjct 17386 GGAGAACCCGACGGATCGGAGGATCATTTTGAGCGCTTGGAACCCG 17431
Score = 154 bits (170), Expect = 1e-32
Identities = 245/346 (71%), Gaps = 14/346 (4%)
Strand=Plus/Minus
Query 6784 CGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGAT 6843
||||||||| |||| || | |||||| | || |||||| | | | | | ||
Sbjct 17431 CGGGTTCCAAGCGCTCAAAATGATCCTCCGATCCGTCGGGTTCTCCCTAATCTTCTTGAC 17372
Query 6844 CACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTC 6903
|| | |||||||||||| |||||| || ||| |||||||||| |||| |||| |
Sbjct 17371 GACCTCGTGCAGCTGGTCCACTCCCTTCCCACTATAATCCGCTTCGCACCCCTCATACGC 17312
Query 6904 CGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAG-TCGCCCTCCTCCCGAG 6962
|||||||||||| |||||||||||||| || | ||||||| || || |||||| ||
Sbjct 17311 CGCCCCAAAGTGCCTCCACTGGAACCCATACA-CGGGCCCGAGATCCCCCTCCCGCC--- 17256
Query 6963 ATGGG----AACCCCCGCTTGTCCAGAAAGTC--TCGAGACCCGTGAGCGTCCCAGATCT 7016
|| | | |||| |||| ||||| || || ||||| || | |||||||||| |
Sbjct 17255 -TGTGCCCCAGCCCCTGCTTCTCCAGGAACTCCTTCGAG--CCATTCCCGTCCCAGATGT 17199
Query 7017 TCACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCT 7076
| ||| | |||||||| | || ||| | ||||| ||||||||| || ||||
Sbjct 17198 GAATTCCCTTTGCAGAGAGCTCGAGAGCGTCCGTCGACCCCCGCACGAACCATAGGAGCT 17139
Query 7077 CCTCGACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGG 7122
|||||| |||||| | | | || || || ||||| ||||||||
Sbjct 17138 CCTCGAGCACGCCGCGCAGGAAGACGCGCTTGGTCGTGAGCAGCGG 17093
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448245634986240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |