Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq2364 154 1e-32 >seq2364 Length=19119 Score = 154 bits (170), Expect = 1e-32 Identities = 245/346 (71%), Gaps = 14/346 (4%) Strand=Plus/Plus Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282 |||||||| ||||| || || || | | | |||||| |||||||||| || |||||| Sbjct 17093 CCGCTGCTCACGACCAAGCGCGTCTTCCTGCGCGGCGTGCTCGAGGAGCTCCTATGGTTC 17152 Query 34283 GTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCT 34342 ||| ||||| | ||| || | |||||||| | ||| | | |||||||||| Sbjct 17153 GTGCGGGGGTCGACGGACGCTCTCGAGCTCTCTGCAAAGGGAATTCACATCTGGGACGGG 17212 Query 34343 CACGGGTCTCGA--GACTTTCTGGACAAGCGGGGGTT----CCCATCTCGGGAGGAGGGC 34396 | || ||||| || || ||||| |||| |||| | | || || |||||| Sbjct 17213 AATGG--CTCGAAGGAGTTCCTGGAGAAGCAGGGGCTGGGGCACA----GGCGGGAGGGG 17266 Query 34397 GA-CTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAG 34455 || || ||||||| | || |||||||||||||| ||||||||||||| |||| |||| | Sbjct 17267 GATCTCGGGCCCG-TGTATGGGTTCCAGTGGAGGCACTTTGGGGCGGCGTATGAGGGGTG 17325 Query 34456 CGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAA 34515 ||||||||| ||| || |||||| |||||||||||| | || || | | | | Sbjct 17326 CGAAGCGGATTATAGTGGGAAGGGAGTGGACCAGCTGCACGAGGTCGTCAAGAAGATTAG 17385 Query 34516 GCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCG 34561 | |||||| || | |||||| | || |||| ||||||||| Sbjct 17386 GGAGAACCCGACGGATCGGAGGATCATTTTGAGCGCTTGGAACCCG 17431 Score = 154 bits (170), Expect = 1e-32 Identities = 245/346 (71%), Gaps = 14/346 (4%) Strand=Plus/Minus Query 6784 CGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGAT 6843 ||||||||| |||| || | |||||| | || |||||| | | | | | || Sbjct 17431 CGGGTTCCAAGCGCTCAAAATGATCCTCCGATCCGTCGGGTTCTCCCTAATCTTCTTGAC 17372 Query 6844 CACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTC 6903 || | |||||||||||| |||||| || ||| |||||||||| |||| |||| | Sbjct 17371 GACCTCGTGCAGCTGGTCCACTCCCTTCCCACTATAATCCGCTTCGCACCCCTCATACGC 17312 Query 6904 CGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAG-TCGCCCTCCTCCCGAG 6962 |||||||||||| |||||||||||||| || | ||||||| || || |||||| || Sbjct 17311 CGCCCCAAAGTGCCTCCACTGGAACCCATACA-CGGGCCCGAGATCCCCCTCCCGCC--- 17256 Query 6963 ATGGG----AACCCCCGCTTGTCCAGAAAGTC--TCGAGACCCGTGAGCGTCCCAGATCT 7016 || | | |||| |||| ||||| || || ||||| || | |||||||||| | Sbjct 17255 -TGTGCCCCAGCCCCTGCTTCTCCAGGAACTCCTTCGAG--CCATTCCCGTCCCAGATGT 17199 Query 7017 TCACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCT 7076 | ||| | |||||||| | || ||| | ||||| ||||||||| || |||| Sbjct 17198 GAATTCCCTTTGCAGAGAGCTCGAGAGCGTCCGTCGACCCCCGCACGAACCATAGGAGCT 17139 Query 7077 CCTCGACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGG 7122 |||||| |||||| | | | || || || ||||| |||||||| Sbjct 17138 CCTCGAGCACGCCGCGCAGGAAGACGCGCTTGGTCGTGAGCAGCGG 17093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448245634986240