Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01-
21] 2,992 sequences; 32,128,072 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq305 174 4e-38
seq2870 163 7e-35
seq2247 136 9e-27
seq2900 125 2e-23
seq278 118 2e-21
>seq305
Length=9259
Score = 174 bits (192), Expect = 4e-38
Identities = 156/196 (80%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| || || ||||| || |||||||| || |||| |||||| | || ||
Sbjct 7883 AGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 7942
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| |||||||| ||||| || ||||| || || | ||||||||||||
Sbjct 7943 TCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCTTCCTTGTCC 8002
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| ||||| ||||| ||| || |||||||| |||||||||
Sbjct 8003 TGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTC 8062
Query 211083 TTTCCCGTGAGAGTCT 211098
|| || ||||| ||||
Sbjct 8063 TTGCCGGTGAGGGTCT 8078
>seq2870
Length=12576
Score = 163 bits (180), Expect = 7e-35
Identities = 159/205 (78%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| | ||||| ||||| || || || ||||| |||||||| || |||| ||||||
Sbjct 9567 CGAAGACGGAGGACGAGGTGGAGCGTCGATTCTTTCTGGATGTTGTAGTCCGAGAGGGTC 9626
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| || || || ||||||||||| |||||||| | ||| || ||||| || || | ||
Sbjct 9627 CGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGGGGGATGCCC 9686
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
||||||||||||||||| || ||||| ||||| ||||| ||| |||||||||||
Sbjct 9687 TCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCAACCTCGAGC 9746
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCT 211098
||||| || || || ||||| ||||
Sbjct 9747 GTGATGGTTTTGCCGGTGAGGGTCT 9771
Score = 150 bits (166), Expect = 4e-31
Identities = 151/196 (77%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| || || || || ||||| || || ||||| || |||| ||||||| || ||
Sbjct 9866 AGGACGAGATGGAGCGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGGGTCCGGCCGTCC 9925
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| |||||||| | ||| || |||||||| || | || |||||||||
Sbjct 9926 TCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 9985
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || ||||| ||||| ||||| ||| || |||||||| ||||| |||
Sbjct 9986 TGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATGGTC 10045
Query 211083 TTTCCCGTGAGAGTCT 211098
|| || ||||| ||||
Sbjct 10046 TTGCCTGTGAGGGTCT 10061
>seq2247
Length=21484
Score = 136 bits (150), Expect = 9e-27
Identities = 120/150 (80%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
|| || || ||||||||||| |||||||| ||||| || |||||||| || | || |||
Sbjct 11602 CCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCC 11543
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
|||||||||||||| || ||||| ||||||||||| || || |||||||| |||
Sbjct 11542 TTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTG 11483
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAAC 211106
|||||||| ||||| || ||||| || |||
Sbjct 11482 ATCGTCTTACCCGTCAGGGTCTTGACGAAC 11453
>seq2900
Length=32347
Score = 125 bits (138), Expect = 2e-23
Identities = 113/142 (80%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
|| || || ||||||||||| || ||||| ||||| || ||||| || || | || |||
Sbjct 25848 CCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGGATACCCTCC 25907
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
||||||||||||||| || ||||| ||||||||||| || || |||||||| |||
Sbjct 25908 TTGTCCTGGATCTTTGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGGGTG 25967
Query 211077 ATCGTCTTTCCCGTGAGAGTCT 211098
|| ||||| |||||||| ||||
Sbjct 25968 ATGGTCTTGCCCGTGAGGGTCT 25989
>seq278
Length=9506
Score = 118 bits (130), Expect = 2e-21
Identities = 116/150 (77%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 210949 GGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAA 211008
|||||| || || || ||||||||||| |||||||| | ||| || ||||| || || |
Sbjct 9506 GGGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGGGGGA 9447
Query 211009 CTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCT 211068
|| ||||||||||||||||| || || || ||||| ||||| ||| || ||||
Sbjct 9446 TGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCCGAGGACTCGACCT 9387
Query 211069 CGAGAGTGATCGTCTTTCCCGTGAGAGTCT 211098
|||| ||||| ||||| || ||||| ||||
Sbjct 9386 CGAGCGTGATGGTCTTGCCGGTGAGGGTCT 9357
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159107563908080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |