Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq305 174 4e-38 seq2870 163 7e-35 seq2247 136 9e-27 seq2900 125 2e-23 seq278 118 2e-21 >seq305 Length=9259 Score = 174 bits (192), Expect = 4e-38 Identities = 156/196 (80%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || ||||| || |||||||| || |||| |||||| | || || Sbjct 7883 AGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 7942 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| ||||| || ||||| || || | |||||||||||| Sbjct 7943 TCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCTTCCTTGTCC 8002 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||| ||||| ||| || |||||||| ||||||||| Sbjct 8003 TGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTC 8062 Query 211083 TTTCCCGTGAGAGTCT 211098 || || ||||| |||| Sbjct 8063 TTGCCGGTGAGGGTCT 8078 >seq2870 Length=12576 Score = 163 bits (180), Expect = 7e-35 Identities = 159/205 (78%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | ||||| ||||| || || || ||||| |||||||| || |||| |||||| Sbjct 9567 CGAAGACGGAGGACGAGGTGGAGCGTCGATTCTTTCTGGATGTTGTAGTCCGAGAGGGTC 9626 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | || || || ||||||||||| |||||||| | ||| || ||||| || || | || Sbjct 9627 CGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGGGGGATGCCC 9686 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||||||||||||||| || ||||| ||||| ||||| ||| ||||||||||| Sbjct 9687 TCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCAACCTCGAGC 9746 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCT 211098 ||||| || || || ||||| |||| Sbjct 9747 GTGATGGTTTTGCCGGTGAGGGTCT 9771 Score = 150 bits (166), Expect = 4e-31 Identities = 151/196 (77%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || || || || ||||| || || ||||| || |||| ||||||| || || Sbjct 9866 AGGACGAGATGGAGCGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGGGTCCGGCCGTCC 9925 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| | ||| || |||||||| || | || ||||||||| Sbjct 9926 TCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 9985 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| ||||| ||||| ||| || |||||||| ||||| ||| Sbjct 9986 TGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATGGTC 10045 Query 211083 TTTCCCGTGAGAGTCT 211098 || || ||||| |||| Sbjct 10046 TTGCCTGTGAGGGTCT 10061 >seq2247 Length=21484 Score = 136 bits (150), Expect = 9e-27 Identities = 120/150 (80%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 || || || ||||||||||| |||||||| ||||| || |||||||| || | || ||| Sbjct 11602 CCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCC 11543 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 |||||||||||||| || ||||| ||||||||||| || || |||||||| ||| Sbjct 11542 TTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTG 11483 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAAC 211106 |||||||| ||||| || ||||| || ||| Sbjct 11482 ATCGTCTTACCCGTCAGGGTCTTGACGAAC 11453 >seq2900 Length=32347 Score = 125 bits (138), Expect = 2e-23 Identities = 113/142 (80%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 || || || ||||||||||| || ||||| ||||| || ||||| || || | || ||| Sbjct 25848 CCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGGATACCCTCC 25907 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 ||||||||||||||| || ||||| ||||||||||| || || |||||||| ||| Sbjct 25908 TTGTCCTGGATCTTTGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGGGTG 25967 Query 211077 ATCGTCTTTCCCGTGAGAGTCT 211098 || ||||| |||||||| |||| Sbjct 25968 ATGGTCTTGCCCGTGAGGGTCT 25989 >seq278 Length=9506 Score = 118 bits (130), Expect = 2e-21 Identities = 116/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 210949 GGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAA 211008 |||||| || || || ||||||||||| |||||||| | ||| || ||||| || || | Sbjct 9506 GGGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGGGGGA 9447 Query 211009 CTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCT 211068 || ||||||||||||||||| || || || ||||| ||||| ||| || |||| Sbjct 9446 TGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCCGAGGACTCGACCT 9387 Query 211069 CGAGAGTGATCGTCTTTCCCGTGAGAGTCT 211098 |||| ||||| ||||| || ||||| |||| Sbjct 9386 CGAGCGTGATGGTCTTGCCGGTGAGGGTCT 9357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159107563908080