Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq305 143 6e-29 seq2870 125 2e-23 seq2247 109 1e-18 seq2900 107 5e-18 seq278 102 2e-16 seq952 96.9 8e-15 >seq305 Length=9259 Score = 143 bits (158), Expect = 6e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | |||||| |||||||| || || || || |||| ||||| || | | || Sbjct 7874 CGGAGACGCAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTG 7933 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || || || |||||||| ||||||||||| || || || ||||||||||| |||||| Sbjct 7934 CGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCT 7993 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| |||||||| ||| || ||||| ||||| |||| || || || | | Sbjct 7994 TCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGC 8053 Query 225673 GTGATCGTCTTGCCCGT 225689 |||||||||||||| || Sbjct 8054 GTGATCGTCTTGCCGGT 8070 >seq2870 Length=12576 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | ||||| |||||||| || |||||||| |||| ||||| || | | || Sbjct 9567 CGAAGACGGAGGACGAGGTGGAGCGTCGATTCTTTCTGGATGTTGTAGTCCGAGAGGGTC 9626 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || || || |||||||| ||||||||||| | || || |||||||| || || || Sbjct 9627 CGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGGGGGATGCCC 9686 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| |||||||| ||| || ||||| ||||| |||| || || || | | Sbjct 9687 TCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCAACCTCGAGC 9746 Query 225673 GTGATCGTCTTGCCCGT 225689 ||||| || ||||| || Sbjct 9747 GTGATGGTTTTGCCGGT 9763 Score = 105 bits (116), Expect = 2e-17 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || ||||| || || || || || | ||||| || | | || | || || Sbjct 9866 AGGACGAGATGGAGCGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGGGTCCGGCCGTCC 9925 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| | || || ||||| ||||| || || |||||||| Sbjct 9926 TCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 9985 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || ||||| ||||| |||| || || || | |||||| ||| Sbjct 9986 TGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATGGTC 10045 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 10046 TTGCCTGT 10053 >seq2247 Length=21484 Score = 109 bits (120), Expect = 1e-18 Identities = 114/150 (76%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 || || || |||||||| ||||||||||| || || || ||||| || || || || ||| Sbjct 11602 CCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCC 11543 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| |||||||| ||| || ||||||||||| || | ||||| || | ||| Sbjct 11542 TTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTG 11483 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAAC 225705 |||||||| ||||||| || || | |||| Sbjct 11482 ATCGTCTTACCCGTCAGGGTCTTGACGAAC 11453 >seq2900 Length=32347 Score = 107 bits (118), Expect = 5e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 || || || |||||||| || || ||||| || || || |||||||| || ||||| ||| Sbjct 25848 CCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGGATACCCTCC 25907 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| ||||||||| ||| || ||||||||||| || | ||||| || | ||| Sbjct 25908 TTGTCCTGGATCTTTGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGGGTG 25967 Query 225676 ATCGTCTTGCCCGT 225689 || ||||||||||| Sbjct 25968 ATGGTCTTGCCCGT 25981 >seq278 Length=9506 Score = 102 bits (112), Expect = 2e-16 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 || || || |||||||| ||||||||||| | || || |||||||| || || || ||| Sbjct 9498 CCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGGGGGATGCCCTCC 9439 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| |||||||| ||| ||| ||||| ||||| |||| || || || | |||| Sbjct 9438 TTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTG 9379 Query 225676 ATCGTCTTGCCCGT 225689 || |||||||| || Sbjct 9378 ATGGTCTTGCCGGT 9365 >seq952 Length=5865 Score = 96.9 bits (106), Expect = 8e-15 Identities = 105/138 (76%), Gaps = 1/138 (1%) Strand=Plus/Plus Query 7725 ATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCT 7784 || || ||| ||||||| ||||| ||||| || ||||||||||||| |||||||||| Sbjct 4393 ATGTCAAGGCCTGGTAAGGTTCTTCGCGTTGCGTCGAATTAAACCACATGCTCCACCGCT 4452 Query 7785 TATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGA 7844 | | | | |||||| || |||||||||||| |||||| |||| | | |||| || Sbjct 4453 TGTGCGGGCCCCCGTCAATTCATTTGAGTTTTAATCTTGCGACCGTACTCCCCAGGCGGT 4512 Query 7845 ATATTTA-CGCGTTAGCT 7861 || ||| ||||||||| Sbjct 4513 CTACTTAGTGCGTTAGCT 4530 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/100 (82%), Gaps = 3/100 (3%) Strand=Plus/Minus Query 6768 TGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAG 6825 |||||| |||||||| |||| ||| ||||| | |||| ||| | || ||| | ||||| Sbjct 5094 TGAGAGGATGATCAGTCACACTGGAACTGAGACACGGTCCA-GACTCCTACGGGAGGCAG 5036 Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAG 6865 |||||| ||||||| |||||||||||||||| ||||| || Sbjct 5035 CAGTGGGGAATATTGGACAATGGGCGAAAGCCTGATCCAG 4996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192485484316448