Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01-
21] 2,992 sequences; 32,128,072 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq305 143 6e-29
seq2870 125 2e-23
seq2247 109 1e-18
seq2900 107 5e-18
seq278 102 2e-16
seq952 96.9 8e-15
>seq305
Length=9259
Score = 143 bits (158), Expect = 6e-29
Identities = 150/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
|| || | |||||| |||||||| || || || || |||| ||||| || | | ||
Sbjct 7874 CGGAGACGCAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTG 7933
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| || || || |||||||| ||||||||||| || || || ||||||||||| ||||||
Sbjct 7934 CGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCT 7993
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|||||||| |||||||| ||| || ||||| ||||| |||| || || || | |
Sbjct 7994 TCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGC 8053
Query 225673 GTGATCGTCTTGCCCGT 225689
|||||||||||||| ||
Sbjct 8054 GTGATCGTCTTGCCGGT 8070
>seq2870
Length=12576
Score = 125 bits (138), Expect = 2e-23
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||| | ||||| |||||||| || |||||||| |||| ||||| || | | ||
Sbjct 9567 CGAAGACGGAGGACGAGGTGGAGCGTCGATTCTTTCTGGATGTTGTAGTCCGAGAGGGTC 9626
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| || || || |||||||| ||||||||||| | || || |||||||| || || ||
Sbjct 9627 CGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGGGGGATGCCC 9686
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|||||||| |||||||| ||| || ||||| ||||| |||| || || || | |
Sbjct 9687 TCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCAACCTCGAGC 9746
Query 225673 GTGATCGTCTTGCCCGT 225689
||||| || ||||| ||
Sbjct 9747 GTGATGGTTTTGCCGGT 9763
Score = 105 bits (116), Expect = 2e-17
Identities = 136/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| || ||||| || || || || || | ||||| || | | || | || ||
Sbjct 9866 AGGACGAGATGGAGCGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGGGTCCGGCCGTCC 9925
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||||||||| | || || ||||| ||||| || || ||||||||
Sbjct 9926 TCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 9985
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| ||| || ||||| ||||| |||| || || || | |||||| |||
Sbjct 9986 TGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATGGTC 10045
Query 225682 TTGCCCGT 225689
||||| ||
Sbjct 10046 TTGCCTGT 10053
>seq2247
Length=21484
Score = 109 bits (120), Expect = 1e-18
Identities = 114/150 (76%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|| || || |||||||| ||||||||||| || || || ||||| || || || || |||
Sbjct 11602 CCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCC 11543
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
||||| |||||||| ||| || ||||||||||| || | ||||| || | |||
Sbjct 11542 TTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTG 11483
Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAAC 225705
|||||||| ||||||| || || | ||||
Sbjct 11482 ATCGTCTTACCCGTCAGGGTCTTGACGAAC 11453
>seq2900
Length=32347
Score = 107 bits (118), Expect = 5e-18
Identities = 104/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|| || || |||||||| || || ||||| || || || |||||||| || ||||| |||
Sbjct 25848 CCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGGATACCCTCC 25907
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
||||| ||||||||| ||| || ||||||||||| || | ||||| || | |||
Sbjct 25908 TTGTCCTGGATCTTTGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGGGTG 25967
Query 225676 ATCGTCTTGCCCGT 225689
|| |||||||||||
Sbjct 25968 ATGGTCTTGCCCGT 25981
>seq278
Length=9506
Score = 102 bits (112), Expect = 2e-16
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|| || || |||||||| ||||||||||| | || || |||||||| || || || |||
Sbjct 9498 CCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGGGGGATGCCCTCC 9439
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
||||| |||||||| ||| ||| ||||| ||||| |||| || || || | ||||
Sbjct 9438 TTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTG 9379
Query 225676 ATCGTCTTGCCCGT 225689
|| |||||||| ||
Sbjct 9378 ATGGTCTTGCCGGT 9365
>seq952
Length=5865
Score = 96.9 bits (106), Expect = 8e-15
Identities = 105/138 (76%), Gaps = 1/138 (1%)
Strand=Plus/Plus
Query 7725 ATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCT 7784
|| || ||| ||||||| ||||| ||||| || ||||||||||||| ||||||||||
Sbjct 4393 ATGTCAAGGCCTGGTAAGGTTCTTCGCGTTGCGTCGAATTAAACCACATGCTCCACCGCT 4452
Query 7785 TATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGA 7844
| | | | |||||| || |||||||||||| |||||| |||| | | |||| ||
Sbjct 4453 TGTGCGGGCCCCCGTCAATTCATTTGAGTTTTAATCTTGCGACCGTACTCCCCAGGCGGT 4512
Query 7845 ATATTTA-CGCGTTAGCT 7861
|| ||| |||||||||
Sbjct 4513 CTACTTAGTGCGTTAGCT 4530
Score = 89.7 bits (98), Expect = 1e-12
Identities = 82/100 (82%), Gaps = 3/100 (3%)
Strand=Plus/Minus
Query 6768 TGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAG 6825
|||||| |||||||| |||| ||| ||||| | |||| ||| | || ||| | |||||
Sbjct 5094 TGAGAGGATGATCAGTCACACTGGAACTGAGACACGGTCCA-GACTCCTACGGGAGGCAG 5036
Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAG 6865
|||||| ||||||| |||||||||||||||| ||||| ||
Sbjct 5035 CAGTGGGGAATATTGGACAATGGGCGAAAGCCTGATCCAG 4996
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192485484316448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |