Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01-
21] 2,992 sequences; 32,128,072 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq2364 107 2e-18
seq2869 87.8 1e-12
>seq2364
Length=19119
Score = 107 bits (118), Expect = 2e-18
Identities = 153/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076
|| ||||||||||||||||| ||||| || || || || ||||| ||||||| | | |
Sbjct 17304 AAGTGCCTCCACTGGAACCCATACACGGGCCCGAGATCCCCCTCCCGCCTGTGCCCCA-G 17246
Query 30077 CCCCT-CTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 30135
||||| ||| |||| || || | || || || |||||||||| | | ||||| |
Sbjct 17245 CCCCTGCTTCTCCAGGAACTCCTTCGAGCCATTCCCGTCCCAGATGTGAATTCCCTTTGC 17186
Query 30136 GGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGC 30195
|||||||| | || || ||||| | |||||||| || |||||||| | ||| |
Sbjct 17185 AGAGAGCTCGAGAGCGTCCGTCGACCCCCGCACGAACCATAGGAGCTCCTCGAGCACGCC 17126
Query 30196 CTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30228
| ||||| | |||||||||||| || ||
Sbjct 17125 GCGCAGGAAGACGCGCTTGGTCGTGAGCAGCGG 17093
>seq2869
Length=12581
Score = 87.8 bits (96), Expect = 1e-12
Identities = 110/145 (76%), Gaps = 6/145 (4%)
Strand=Plus/Plus
Query 53529 AGATGGGCGACAAGTTTGCATC-CTTCACGGCGCAAAAGGGGACATGCGG-AGCGGTCCT 53586
||| |||||| ||||| || || | |||||| ||| ||||||||| ||| | | |||
Sbjct 4971 AGACGGGCGATAAGTTCGCGTCGCGTCACGG-GCAGAAGGGGACAATCGGCATCA--CCT 5027
Query 53587 GACTCAG-GAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACC 53645
| || || |||||||||||| | ||||| || ||||||||||||||||||||
Sbjct 5028 ACCGCACCGAAGACATGCCCTTCACCGCCGACGGCGTCACGCCCGACCTCATCATCAACC 5087
Query 53646 CCCACGCCTTTCCCTCCAGGATGAC 53670
|||||||| | ||||| | |||||
Sbjct 5088 CCCACGCCATCCCCTCGCGCATGAC 5112
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406148389258912
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |