Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq2364 107 2e-18 seq2869 87.8 1e-12 >seq2364 Length=19119 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 || ||||||||||||||||| ||||| || || || || ||||| ||||||| | | | Sbjct 17304 AAGTGCCTCCACTGGAACCCATACACGGGCCCGAGATCCCCCTCCCGCCTGTGCCCCA-G 17246 Query 30077 CCCCT-CTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 30135 ||||| ||| |||| || || | || || || |||||||||| | | ||||| | Sbjct 17245 CCCCTGCTTCTCCAGGAACTCCTTCGAGCCATTCCCGTCCCAGATGTGAATTCCCTTTGC 17186 Query 30136 GGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGC 30195 |||||||| | || || ||||| | |||||||| || |||||||| | ||| | Sbjct 17185 AGAGAGCTCGAGAGCGTCCGTCGACCCCCGCACGAACCATAGGAGCTCCTCGAGCACGCC 17126 Query 30196 CTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30228 | ||||| | |||||||||||| || || Sbjct 17125 GCGCAGGAAGACGCGCTTGGTCGTGAGCAGCGG 17093 >seq2869 Length=12581 Score = 87.8 bits (96), Expect = 1e-12 Identities = 110/145 (76%), Gaps = 6/145 (4%) Strand=Plus/Plus Query 53529 AGATGGGCGACAAGTTTGCATC-CTTCACGGCGCAAAAGGGGACATGCGG-AGCGGTCCT 53586 ||| |||||| ||||| || || | |||||| ||| ||||||||| ||| | | ||| Sbjct 4971 AGACGGGCGATAAGTTCGCGTCGCGTCACGG-GCAGAAGGGGACAATCGGCATCA--CCT 5027 Query 53587 GACTCAG-GAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACC 53645 | || || |||||||||||| | ||||| || |||||||||||||||||||| Sbjct 5028 ACCGCACCGAAGACATGCCCTTCACCGCCGACGGCGTCACGCCCGACCTCATCATCAACC 5087 Query 53646 CCCACGCCTTTCCCTCCAGGATGAC 53670 |||||||| | ||||| | ||||| Sbjct 5088 CCCACGCCATCCCCTCGCGCATGAC 5112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406148389258912