Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq2870 152 1e-31 seq305 152 1e-31 seq2247 134 3e-26 seq2900 125 1e-23 seq278 105 1e-17 seq41 93.3 9e-14 >seq2870 Length=12576 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || || ||||| | ||| || || || ||||||||||| | Sbjct 9850 ACCACCACGCAGACGGAGGACGAGATGGAGCGTCGACTCCTTCTGAATGTTGTAGTCCGA 9909 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||| ||||| || || || || || |||||||| || || |||||| ||| Sbjct 9910 GAGGGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGCGG 9969 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| || ||||| || || ||| | ||||| |||||||| | ||||| Sbjct 9970 GATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGAC 10029 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCT 283083 ||||| ||||| ||||| || || | |||| Sbjct 10030 CTCGAGCGTGATGGTCTTGCCTGTGAGGGTCT 10061 Score = 132 bits (146), Expect = 1e-25 Identities = 156/211 (74%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || || || || || || || || | ||| |||||| |||||||||||||| | Sbjct 9561 CCGCCGCGAAGACGGAGGACGAGGTGGAGCGTCGATTCTTTCTGGATGTTGTAGTCCGAG 9620 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||| ||||| || || || || || |||||||| || || ||||| || Sbjct 9621 AGGGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGGGGG 9680 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| || || ||| | ||||| |||||||| | || || Sbjct 9681 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCAACC 9740 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCT 283083 ||||| ||||| || || || || | |||| Sbjct 9741 TCGAGCGTGATGGTTTTGCCGGTGAGGGTCT 9771 >seq305 Length=9259 Score = 152 bits (168), Expect = 1e-31 Identities = 162/214 (76%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 282870 GAACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCA 282929 |||||||| || || || || || || || | ||| || || |||||||||||||| Sbjct 7865 GAACCACCGCGGAGACGCAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCC 7924 Query 282930 GCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCC 282989 | ||| |||||||| ||||| || || || || || ||||| | || || ||||| | Sbjct 7925 GAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGC 7984 Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049 || ||||| |||||||| |||||||| || || ||| | ||||| |||||||| | ||| Sbjct 7985 GGGATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCG 8044 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCT 283083 || ||||| ||||||||||| || || | |||| Sbjct 8045 ACCTCGAGCGTGATCGTCTTGCCGGTGAGGGTCT 8078 >seq2247 Length=21484 Score = 134 bits (148), Expect = 3e-26 Identities = 122/154 (79%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 282937 TGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATAC 282996 ||||||| ||||| || || || || || ||||||| || || |||||| || || | Sbjct 11607 TGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGC 11548 Query 282997 CCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGA 283056 |||||||||| |||||||| || || ||| | ||||| ||||| |||| || || |||| Sbjct 11547 CCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGA 11488 Query 283057 GAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 | ||||||||||||||||||| ||||| ||||| Sbjct 11487 GGGTGATCGTCTTACCCGTCAGGGTCTTGACGAA 11454 >seq2900 Length=32347 Score = 125 bits (138), Expect = 1e-23 Identities = 116/147 (79%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 282937 TGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATAC 282996 ||||||| ||||| || || || ||||||||||| | || || ||||| || |||| Sbjct 25843 TGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGGATAC 25902 Query 282997 CCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGA 283056 |||||||||| ||||||||||| || ||| | ||||| |||||||||| || || |||| Sbjct 25903 CCTCCTTGTCCTGGATCTTTGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGA 25962 Query 283057 GAGTGATCGTCTTACCCGTCAAAGTCT 283083 | ||||| ||||| ||||| | |||| Sbjct 25963 GGGTGATGGTCTTGCCCGTGAGGGTCT 25989 >seq278 Length=9506 Score = 105 bits (116), Expect = 1e-17 Identities = 112/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 282936 GTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATA 282995 || ||||| ||||| || || || || || |||||||| || || ||||| || || Sbjct 9504 GTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGGGGGATG 9445 Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 ||||||||||| |||||||| || || || | ||||| |||||||| | ||||| ||| Sbjct 9444 CCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCG 9385 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCT 283083 || ||||| ||||| || || | |||| Sbjct 9384 AGCGTGATGGTCTTGCCGGTGAGGGTCT 9357 >seq41 Length=11186 Score = 93.3 bits (102), Expect = 9e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282 || ||||||||||| || | |||||| | || || ||||| ||||| || || || | Sbjct 4210 CTCATCGGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTG 4151 Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342 |||| || || || ||||||| || ||||||| ||||||||||| || |||||| Sbjct 4150 CTCGTCGCCCTCGGCAACGAGAAGTACTACAACTCCACGAACCCCTTCGACTTCATGGAG 4091 Query 230343 CTCATTTCACTCCAGGGGAAAACTAA 230368 | ||||| || || ||||| || || Sbjct 4090 ATGATTTCCCTGCAAGGGAAGACCAA 4065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046699073252768