Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01-
21] 2,992 sequences; 32,128,072 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq2870 152 1e-31
seq305 152 1e-31
seq2247 134 3e-26
seq2900 125 1e-23
seq278 105 1e-17
seq41 93.3 9e-14
>seq2870
Length=12576
Score = 152 bits (168), Expect = 1e-31
Identities = 161/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||||||||| || || || ||||| | ||| || || || ||||||||||| |
Sbjct 9850 ACCACCACGCAGACGGAGGACGAGATGGAGCGTCGACTCCTTCTGAATGTTGTAGTCCGA 9909
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || ||||| ||||| || || || || || |||||||| || || |||||| |||
Sbjct 9910 GAGGGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGCGG 9969
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| || ||||| || || ||| | ||||| |||||||| | |||||
Sbjct 9970 GATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGAC 10029
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCT 283083
||||| ||||| ||||| || || | ||||
Sbjct 10030 CTCGAGCGTGATGGTCTTGCCTGTGAGGGTCT 10061
Score = 132 bits (146), Expect = 1e-25
Identities = 156/211 (74%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|| || || || || || || || || | ||| |||||| |||||||||||||| |
Sbjct 9561 CCGCCGCGAAGACGGAGGACGAGGTGGAGCGTCGATTCTTTCTGGATGTTGTAGTCCGAG 9620
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || ||||| ||||| || || || || || |||||||| || || ||||| ||
Sbjct 9621 AGGGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGGGGG 9680
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| |||||||| || || ||| | ||||| |||||||| | || ||
Sbjct 9681 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCAACC 9740
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCT 283083
||||| ||||| || || || || | ||||
Sbjct 9741 TCGAGCGTGATGGTTTTGCCGGTGAGGGTCT 9771
>seq305
Length=9259
Score = 152 bits (168), Expect = 1e-31
Identities = 162/214 (76%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 282870 GAACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCA 282929
|||||||| || || || || || || || | ||| || || ||||||||||||||
Sbjct 7865 GAACCACCGCGGAGACGCAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCC 7924
Query 282930 GCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCC 282989
| ||| |||||||| ||||| || || || || || ||||| | || || ||||| |
Sbjct 7925 GAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGC 7984
Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049
|| ||||| |||||||| |||||||| || || ||| | ||||| |||||||| | |||
Sbjct 7985 GGGATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCG 8044
Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCT 283083
|| ||||| ||||||||||| || || | ||||
Sbjct 8045 ACCTCGAGCGTGATCGTCTTGCCGGTGAGGGTCT 8078
>seq2247
Length=21484
Score = 134 bits (148), Expect = 3e-26
Identities = 122/154 (79%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 282937 TGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATAC 282996
||||||| ||||| || || || || || ||||||| || || |||||| || || |
Sbjct 11607 TGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGC 11548
Query 282997 CCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGA 283056
|||||||||| |||||||| || || ||| | ||||| ||||| |||| || || ||||
Sbjct 11547 CCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGA 11488
Query 283057 GAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
| ||||||||||||||||||| ||||| |||||
Sbjct 11487 GGGTGATCGTCTTACCCGTCAGGGTCTTGACGAA 11454
>seq2900
Length=32347
Score = 125 bits (138), Expect = 1e-23
Identities = 116/147 (79%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 282937 TGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATAC 282996
||||||| ||||| || || || ||||||||||| | || || ||||| || ||||
Sbjct 25843 TGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGGATAC 25902
Query 282997 CCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGA 283056
|||||||||| ||||||||||| || ||| | ||||| |||||||||| || || ||||
Sbjct 25903 CCTCCTTGTCCTGGATCTTTGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGA 25962
Query 283057 GAGTGATCGTCTTACCCGTCAAAGTCT 283083
| ||||| ||||| ||||| | ||||
Sbjct 25963 GGGTGATGGTCTTGCCCGTGAGGGTCT 25989
>seq278
Length=9506
Score = 105 bits (116), Expect = 1e-17
Identities = 112/148 (76%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 282936 GTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATA 282995
|| ||||| ||||| || || || || || |||||||| || || ||||| || ||
Sbjct 9504 GTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGGGGGATG 9445
Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055
||||||||||| |||||||| || || || | ||||| |||||||| | ||||| |||
Sbjct 9444 CCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCG 9385
Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCT 283083
|| ||||| ||||| || || | ||||
Sbjct 9384 AGCGTGATGGTCTTGCCGGTGAGGGTCT 9357
>seq41
Length=11186
Score = 93.3 bits (102), Expect = 9e-14
Identities = 108/146 (74%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282
|| ||||||||||| || | |||||| | || || ||||| ||||| || || || |
Sbjct 4210 CTCATCGGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTG 4151
Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342
|||| || || || ||||||| || ||||||| ||||||||||| || ||||||
Sbjct 4150 CTCGTCGCCCTCGGCAACGAGAAGTACTACAACTCCACGAACCCCTTCGACTTCATGGAG 4091
Query 230343 CTCATTTCACTCCAGGGGAAAACTAA 230368
| ||||| || || ||||| || ||
Sbjct 4090 ATGATTTCCCTGCAAGGGAAGACCAA 4065
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046699073252768
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |