Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01- 21] 2,992 sequences; 32,128,072 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq305 111 1e-19 seq2900 93.3 3e-14 seq2870 91.5 1e-13 >seq305 Length=9259 Score = 111 bits (122), Expect = 1e-19 Identities = 142/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| ||||| |||||| ||||||||||| || | || ||| |||| || Sbjct 7886 ACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCG 7945 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||| | |||||||| || | || | ||||||||| ||| Sbjct 7946 AGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCTTCCTTGTCCTGG 8005 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | || ||||| | ||| || ||||| | ||| |||||||| Sbjct 8006 ATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTG 8065 Query 44309 CCCGTGAGGGTCTTCA 44324 || |||||||||| || Sbjct 8066 CCGGTGAGGGTCTGCA 8081 >seq2900 Length=32347 Score = 93.3 bits (102), Expect = 3e-14 Identities = 111/148 (75%), Gaps = 2/148 (1%) Strand=Plus/Plus Query 44181 CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCT 44240 |||| || |||||||| ||||||||||| | |||||||| || | || | ||| |||| Sbjct 25849 CGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGGATACCCTCCT 25908 Query 44241 TTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 | ||| ||||| ||| | | ||| | |||||||| | || |||||||| | || Sbjct 25909 TGTCCTGGATCTT-TGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGGGTG 25967 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGA 44327 || ||||| ||||||||||||| | ||| Sbjct 25968 ATGGTCTTGCCCGTGAGGGTCTGCCCGA 25995 >seq2870 Length=12576 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| ||||| || || ||||||||||| || | ||| || |||| || Sbjct 9579 ACGAGGTGGAGCGTCGATTCTTTCTGGATGTTGTAGTCCGAGAGGGTCCGGCCGTCCTCA 9638 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || |||||||| |||||||| || | || | || ||||| ||| Sbjct 9639 AGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGG 9698 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | || ||||| | ||| || ||||| | ||| || || || Sbjct 9699 ATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATGGTTTTG 9758 Query 44309 CCCGTGAGGGTCT 44321 || |||||||||| Sbjct 9759 CCGGTGAGGGTCT 9771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359977272950064