Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basidioascus_20undulatus_20[genbank_20GCA_5F000826855.1_202015-01-
21] 2,992 sequences; 32,128,072 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq305 111 1e-19
seq2900 93.3 3e-14
seq2870 91.5 1e-13
>seq305
Length=9259
Score = 111 bits (122), Expect = 1e-19
Identities = 142/196 (72%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| ||||| |||||| ||||||||||| || | || ||| |||| ||
Sbjct 7886 ACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCG 7945
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || || ||||| | |||||||| || | || | ||||||||| |||
Sbjct 7946 AGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCTTCCTTGTCCTGG 8005
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | || ||||| | ||| || ||||| | ||| ||||||||
Sbjct 8006 ATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTG 8065
Query 44309 CCCGTGAGGGTCTTCA 44324
|| |||||||||| ||
Sbjct 8066 CCGGTGAGGGTCTGCA 8081
>seq2900
Length=32347
Score = 93.3 bits (102), Expect = 3e-14
Identities = 111/148 (75%), Gaps = 2/148 (1%)
Strand=Plus/Plus
Query 44181 CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCT 44240
|||| || |||||||| ||||||||||| | |||||||| || | || | ||| ||||
Sbjct 25849 CGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCGGGGGGGATACCCTCCT 25908
Query 44241 TTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299
| ||| ||||| ||| | | ||| | |||||||| | || |||||||| | ||
Sbjct 25909 TGTCCTGGATCTT-TGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGGGTG 25967
Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGA 44327
|| ||||| ||||||||||||| | |||
Sbjct 25968 ATGGTCTTGCCCGTGAGGGTCTGCCCGA 25995
>seq2870
Length=12576
Score = 91.5 bits (100), Expect = 1e-13
Identities = 136/193 (70%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| ||||| || || ||||||||||| || | ||| || |||| ||
Sbjct 9579 ACGAGGTGGAGCGTCGATTCTTTCTGGATGTTGTAGTCCGAGAGGGTCCGGCCGTCCTCA 9638
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || || |||||||| |||||||| || | || | || ||||| |||
Sbjct 9639 AGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGG 9698
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | || ||||| | ||| || ||||| | ||| || || ||
Sbjct 9699 ATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCAACCTCGAGCGTGATGGTTTTG 9758
Query 44309 CCCGTGAGGGTCT 44321
|| ||||||||||
Sbjct 9759 CCGGTGAGGGTCT 9771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359977272950064
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |