Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq5 127 4e-24 seq9 84.2 5e-11 >seq5 Length=1807594 Score = 127 bits (140), Expect = 4e-24 Identities = 140/184 (76%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 230428 GACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGA 230486 |||||| | || || ||| || |||||||||||||| | || ||| | ||||||||||| Sbjct 1325814 GACGCTCTGCCGTG-CGCGCTCATTGGCATGAACGCGAAGCTCATGTGCCAGTACATCGA 1325872 Query 230487 ATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAA 230546 ||||| ||||||||| | | ||||| || || ||||||| | ||||| | || Sbjct 1325873 GTTCGTGGCCGACCGCCTGCTCGTTGCCCTCGGCGACGAGAAGTTCTACAAGGTCACCAA 1325932 Query 230547 CCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCG 230606 ||| || | || ||||| | || ||||| || || ||||||||||||||||| ||||| Sbjct 1325933 CCCTTTCGACTTCATGGACATGATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAGCG 1325992 Query 230607 TGTC 230610 |||| Sbjct 1325993 TGTC 1325996 Score = 84.2 bits (92), Expect = 5e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 230444 GCCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCA 230503 ||||||| || ||||||| || ||| | || |||||||||||||| || || ||| Sbjct 1323075 GCCTTATCGGTATGAACGTCACTCTCATGCGCCAATACATCGAATTCGTCGCGGATCGCC 1323016 Query 230504 TTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGG 230563 || | ||| | ||||| | | ||| || || | || ||||| | || |||| Sbjct 1323015 TTCTGGTTTCGCTTGGAAATGCGAAGCATTATCACACCGCCAATCCCTTCGAATGGATGG 1322956 Query 230564 AGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGA 230623 | | ||||| || || || ||||||||||| || || |||||||| |||||||| | Sbjct 1322955 ACATGATTTCCCTCCAGGGCAAGACCAACTTTTTTGAGAAGCGTGTGTCCGACTATCAAA 1322896 Query 230624 G 230624 | Sbjct 1322895 G 1322895 >seq9 Length=1298041 Score = 84.2 bits (92), Expect = 5e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 319810 CCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCA 319869 ||||||| |||||| || ||||| || | | | || | |||||||| || || Sbjct 626968 CCGTCGATATCGTGCTCGACGTAGAAGGTACGGACATCGTCGGGTGAGGGGAAGCCCTCG 626909 Query 319870 AGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACAC 319929 | ||||||||| ||||||||||| ||||| || || || | ||||| | || ||| Sbjct 626908 ACCTGGCCGTTGGTGATAGCGCGCATGAGGGTGGACTTTCCGGTACCGTTGCGACCGCAC 626849 Query 319930 AGACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCG-CGTGTTGTTCAGAAGAATTTTTCC 319988 ||||||||||||| || || || | | ||| | | | |||| || || || || | Sbjct 626848 AGACCGTAGCGGTGACCACGCTTGA-GACGAAGGGTGGCGGTGTTGAGCAGGATCTTGGC 626790 Query 319989 ACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACCGACTTC 320036 ||| || || || || || | || | || |||||||| || |||| Sbjct 626789 ACCGTAGGCGAGGGAGAACTGGCAGTTGCAAAGATCCTCGCCCTCTTC 626742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057817114888040