Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq4 129 5e-25 seq1 116 3e-21 >seq4 Length=1918071 Score = 129 bits (142), Expect = 5e-25 Identities = 154/208 (74%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 |||| |||| || ||||| || || |||||||| ||| || |||||| ||| || | Sbjct 1158211 CAAGATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAACGTGCGCCCATCTTCCA 1158270 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650 ||| ||||| || ||||||||||||| ||||||||||| || |||||||||||| | Sbjct 1158271 ACTGCTTTCCGGCAAAGATGAGACGCTGTTGATCGGGAGGGATACCCTCCTTGTCTTGGA 1158330 Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710 | ||| ||||| | |||| |||||| | ||| ||||| | ||| | || |||| Sbjct 1158331 TCTTTGCCTTAACGTTGTCGATGGTGTCGGACGACTCTACCTCAAGGGTGATGGTCTTGC 1158390 Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| || || || || || || ||||| Sbjct 1158391 CGGTAAGCGTCTTGACGAAGATTTGCAT 1158418 Score = 123 bits (136), Expect = 2e-23 Identities = 154/210 (73%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 118530 ACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 |||||| |||| || ||||| || || ||||||||||| || ||||| ||||| Sbjct 1157981 ACCAAGATGGAGGGTTGACTCCTTCTGGATGTTGTAATCCGACAGGGTGCGGCCGTCCTC 1158040 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || |||||| |||| |||||||||||||| || || ||||| ||||||||| Sbjct 1158041 GAGCTGCTTACCAGCGAAGATAAGACGCTGCTGATCCGGGGGAATGCCTTCCTTGTCTTG 1158100 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || || || | |||| ||||| | |||||||| | ||| | ||| || Sbjct 1158101 AATCTTCGCCTTTACGTTGTCGATCGTGTCGGACGATTCGACCTCAAGGGTGATCGTCTT 1158160 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||| || || || || |||||||| Sbjct 1158161 TCCCGTCAACGTCTTGACGAAGATCTGCAT 1158190 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || ||||||||||| || | || || |||||||||||| || ||| Sbjct 1158450 GTCGACTCCTTCTGAATGTTGTAGTCAGAGAGGGTACGGCCATCCTCGAGCTGCTTGCCA 1158509 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| | || ||||| ||||| || |||||||||||||| ||| || || Sbjct 1158510 GCGAAGATCAAGCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTG 1158569 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| |||||| | | |||||| |||| || | || ||||| |||| || Sbjct 1158570 ACGTTGTCGATGGTGTCGGAGGACTCGACTTCGAGCGTGATAGTCTTGCCAGTCAAGGTC 1158629 Query 118722 TTTACAAAAATCTGCAT 118738 || ||||| |||||||| Sbjct 1158630 TTCACAAAGATCTGCAT 1158646 Score = 107 bits (118), Expect = 2e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | ||| ||| || ||||||||||| ||| | ||||| ||| || Sbjct 1157702 CACCAAGTGCAGCGTACTCTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGTCCATCTTC 1157761 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||| || ||||| ||| ||||||| |||||||| ||||| || || ||||||||||| Sbjct 1157762 GAGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTG 1157821 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | || | ||||| | ||||||||| | || | || || Sbjct 1157822 GATCTTCGCCTTCACGTTGTCAATCGTGTCGGAAGACTCGACCTCAAGAGTGATAGTCTT 1157881 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 ||||| || || || || || ||||||||| || Sbjct 1157882 TCCGGTGAGGGTCTTGACGAAGATCTGCATGCCT 1157915 >seq1 Length=3319996 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || || ||||| || ||| | |||||| |||||||||||| || || ||| | Sbjct 2718559 CTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAA 2718618 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||||||||||||||| ||||| || || |||||||| || ||| || || || | Sbjct 2718619 GATGAGACGCTGCTGGTCGGGTGGGATACCCTCCTTATCCTGAATCTTCGCCTTCACGTT 2718678 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| |||||||| ||| ||||| | ||| | || |||||||| || || || || Sbjct 2718679 GTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 2718738 Query 118727 AAAAATCTGCAT 118738 || |||||||| Sbjct 2718739 GAAGATCTGCAT 2718750 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 |||||||| || || |||||||||||| | ||||| |||||||| || || || Sbjct 2719060 GTAGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCGTCCTCGAGTTGCTTGCCG 2719119 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| || |||||||| ||||| || |||||||||||||| || ||| || Sbjct 2719120 GCAAAGATAAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTC 2719179 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| ||||||| |||||| |||| || | ||| ||||| || || || Sbjct 2719180 ACGTTGTCGATCGTGTCCGAAGACTCGACTTCGAGAGTGATCGTCTTGCCCGTAAGGGTC 2719239 Query 118722 TTTACAAAAATCTGCAT 118738 || || || |||||||| Sbjct 2719240 TTGACGAAGATCTGCAT 2719256 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||| ||| | || || |||||| ||||| Sbjct 2718825 GTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTACGACCATCCTCCAGCTG 2718884 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| |||| || ||||||||||| ||||| || |||||||||||| || || Sbjct 2718885 CTTCCCCGCGAAGATCAGGCGCTGCTGATCCGGAGGGATACCCTCCTTGTCTTGGATCTT 2718944 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| ||| || | ||||||||| | || | || |||||||| Sbjct 2718945 CGCCTTCACGTTGTCGATGGTATCGGACGACTCGACCTCAAGCGTGATGGTCTTGCCGGT 2719004 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || || || |||||||| Sbjct 2719005 AAGAGTCTTGACGAAGATCTGCAT 2719028 Score = 86.0 bits (94), Expect = 5e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | || ||||| || || |||||||| ||||||| || || |||||| Sbjct 391470 CACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTACGTCCATCCTC 391411 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGC 118635 |||||| || ||||| |||| || |||||||| || || || |||| Sbjct 391410 GAGCTGCTTGCCAGCAAAGATAAGGCGCTGCTGGTCTGGGGGAATGC 391364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433827714047536