Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq4 125 5e-24 seq1 120 2e-22 >seq4 Length=1918071 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | ||||||| ||| | ||||| || ||||| |||||||||||||| Sbjct 1157685 CCGCCACGGAGACGAAGCACCAAGTGCAGCGTACTCTCCTTCTGAATGTTGTAGTCGGAG 1157744 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| || | || || | ||||| || ||||| ||||| |||||||||||| || Sbjct 1157745 AGCGTGCGTCCATCTTCGAGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGG 1157804 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | | | | |||| |||| || ||||| Sbjct 1157805 ATACCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATCGTGTCGGAAGACTCGACC 1157864 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || || |||||||| || || || ||||||||||| Sbjct 1157865 TCAAGAGTGATAGTCTTTCCGGTGAGGGTCTTGACGAAGATCTGCAT 1157911 Score = 116 bits (128), Expect = 2e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | || || ||||| | ||| || ||||| ||||||||||| || Sbjct 1158420 CCGCCACGAAGACGGAGGACGAGGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCAGAG 1158479 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || |||| | || || | ||||||||| ||||| || | || ||||||||| ||| Sbjct 1158480 AGGGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAAGCGTTGCTGGTCGGGGGGA 1158539 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | | | | || | |||| || ||||| Sbjct 1158540 ATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACT 1158599 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||| || ||||| || | || ||||||||||||||||| Sbjct 1158600 TCGAGCGTGATAGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1158646 Score = 105 bits (116), Expect = 4e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||||||||||| | || | || ||||||||||| || || || Sbjct 1158228 TCCTTCTGGATGTTGTAGTCGGACAACGTGCGCCCATCTTCCAACTGCTTTCCGGCAAAG 1158287 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 ||||| ||||| || ||| || | | ||||||||| |||||| ||| | | | Sbjct 1158288 ATGAGACGCTGTTGATCGGGAGGGATACCCTCCTTGTCTTGGATCTTTGCCTTAACGTTG 1158347 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | |||| ||| || || || | |||||||| |||||||| || || || || Sbjct 1158348 TCGATGGTGTCGGACGACTCTACCTCAAGGGTGATGGTCTTGCCGGTAAGCGTCTTGACG 1158407 Query 34379 AAGATCTGCAT 34389 ||||| ||||| Sbjct 1158408 AAGATTTGCAT 1158418 Score = 102 bits (112), Expect = 5e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||| || ||||| ||| |||| || | |||||| || ||||| Sbjct 1158000 TCCTTCTGGATGTTGTAATCCGACAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAAG 1158059 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || |||||||| || ||| | || |||||||| ||||| ||||| | | Sbjct 1158060 ATAAGACGCTGCTGATCCGGGGGAATGCCTTCCTTGTCTTGAATCTTCGCCTTTACGTTG 1158119 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | |||| |||| ||||||||| || | ||||| || || || || | || || || Sbjct 1158120 TCGATCGTGTCGGACGATTCGACCTCAAGGGTGATCGTCTTTCCCGTCAACGTCTTGACG 1158179 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 1158180 AAGATCTGCAT 1158190 >seq1 Length=3319996 Score = 120 bits (132), Expect = 2e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||||||||| || ||| | || |||| |||||| || ||||| Sbjct 2718838 TCCTTCTGGATGTTGTAGTCGGAGAGTGTACGACCATCCTCCAGCTGCTTCCCCGCGAAG 2718897 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || |||||||| || || | | ||||||||| ||||| ||| | | | Sbjct 2718898 ATCAGGCGCTGCTGATCCGGAGGGATACCCTCCTTGTCTTGGATCTTCGCCTTCACGTTG 2718957 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | ||||| ||| ||||| || | ||||||||| |||||||| ||||| || || Sbjct 2718958 TCGATGGTATCGGACGACTCGACCTCAAGCGTGATGGTCTTGCCGGTAAGAGTCTTGACG 2719017 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 2719018 AAGATCTGCAT 2719028 Score = 116 bits (128), Expect = 2e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | |||| || ||||| |||||||| ||||| Sbjct 2719030 CCACCGCGAAGACGGAGGACAAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCGGAG 2719089 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | |||||||| || || || || |||||||||||| ||| Sbjct 2719090 AGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCGGGGGGA 2719149 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| |||||| ||| | | | | |||| || | || ||||| Sbjct 2719150 ATGCCCTCCTTGTCCTGGATCTTTGCCTTCACGTTGTCGATCGTGTCCGAAGACTCGACT 2719209 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || ||||| || || || || || ||||||||||| Sbjct 2719210 TCGAGAGTGATCGTCTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 2719256 Score = 107 bits (118), Expect = 1e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 34193 GTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCT 34252 || || || ||||| ||||| |||||||| || ||| | || || | ||||||||| Sbjct 2718554 GTGCTCTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCCTCGAGCTGCTTGCCC 2718613 Query 34253 GCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT 34312 ||||| ||||| |||||||||||| || | | |||||| || ||||| ||| Sbjct 2718614 GCGAAGATGAGACGCTGCTGGTCGGGTGGGATACCCTCCTTATCCTGAATCTTCGCCTTC 2718673 Query 34313 AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTT 34372 | | | | || | || | || || || |||| |||||||| ||||||||||| || Sbjct 2718674 ACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTC 2718733 Query 34373 TTCACAAAGATCTGCAT 34389 || || ||||||||||| Sbjct 2718734 TTGACGAAGATCTGCAT 2718750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323069999780480