Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq5 96.9 7e-15 seq8 87.8 4e-12 >seq5 Length=1807594 Score = 96.9 bits (106), Expect = 7e-15 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 157259 TACTCGGCCACTCTATTCTCAAAAAAGTTGGTCTTTCCCTGGAGAGAAATCATGTCCATC 157318 || |||| ||| | |||||||||||||||||||| |||||||| ||||||||||||||| Sbjct 1322901 TAGTCGGACACACGCTTCTCAAAAAAGTTGGTCTTGCCCTGGAGGGAAATCATGTCCATC 1322960 Query 157319 CACTCGAATGGGTTGGCG 157336 || ||||| || |||||| Sbjct 1322961 CATTCGAAGGGATTGGCG 1322978 Score = 96.9 bits (106), Expect = 7e-15 Identities = 126/171 (74%), Gaps = 9/171 (5%) Strand=Plus/Minus Query 157274 TTCTCAAAAAAGTTGGTCTTTCCCTGGAGAGAAATCATGTCCATCCACTCGAATGGGTTG 157333 ||||| || ||||||||||| |||||||| || ||||||||||| | ||||| |||||| Sbjct 1325989 TTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAGATCATGTCCATGAAGTCGAAAGGGTTG 1325930 Query 157334 GCGCAGTTGTACACCTTGTCGTACCCCAGCTGGTTCAGCCAGTA----GTCCGCCACAAA 157389 | | ||||| | ||| |||| || || || || | || | ||| ||||| || Sbjct 1325929 GTGACCTTGTAGAACTTCTCGTCGCCGAG--GG--CAACGAGCAGGCGGTCGGCCACGAA 1325874 Query 157390 CTTGATGTACTCTGTCATGCTCTTCTCGCTGATACCGATGAGCGCG-ACGG 157439 || |||||||| |||| |||| || | || || ||||||||| |||| Sbjct 1325873 CTCGATGTACTGGCACATGAGCTTCGCGTTCATGCCAATGAGCGCGCACGG 1325823 >seq8 Length=1462401 Score = 87.8 bits (96), Expect = 4e-12 Identities = 154/219 (70%), Gaps = 8/219 (4%) Strand=Plus/Plus Query 248884 GAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC-ATAGA 248942 |||||| ||||||||||||||||| ||||||||||| |||||| | | || ||| Sbjct 1394910 GAACGACCCCAGCACATGTTGATGCGTGTGGCTGTCGGCATTCAC---GGTAACGATATC 1394966 Query 248943 GAGCGTGC--TCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCG 249000 || || || |||| || ||| ||| |||||| | || || || |||| Sbjct 1394967 GACCGGGCCATCGAAACCTACCAACTTATGTCCCAACGCTACTTCACCCACGCGTCACCC 1395026 Query 249001 ACGCTCTTCAACGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCAT 249059 || |||||||||||||| || | ||| | |||||| ||||| ||||| ||| | || Sbjct 1395027 ACCCTCTTCAACGCCGGAACACCTCATC-CTCAGCTCAGCTCATGCTTCCTTGTATGTAT 1395085 Query 249060 GCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAA 249098 | | || ||||| |||| || || || || || || || Sbjct 1395086 GAAGGATGACTCCATCGAAGGTATCTACGATACTCTCAA 1395124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073759411122944